Empedobacter haloabium: E7V67_012395
Help
Entry
E7V67_012395 CDS
T09755
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E7V67_012395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehb03019
]
E7V67_012395
Enzymes [BR:
ehb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E7V67_012395
Messenger RNA biogenesis [BR:
ehb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E7V67_012395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
WUR15867
UniProt:
A0ABZ1UT04
LinkDB
All DBs
Position
complement(2816441..2817820)
Genome browser
AA seq
459 aa
AA seq
DB search
MSFASLQLIDPLLRTLAALGYDDPTPVQKQAIPAVLAGRDLMAAAQTGTGKTAGFALPLL
QRLTLAGAVGPHGVRCLVLVPTRELAEQVYDSFRRYGAALPLRSFVAYGGVPLEPQVNKL
RKGLDVLVATPGRLLDLLRQGALTFAQLETLVLDEADRMLDLGFAADLDAVFAALPAQRQ
TLLFSATFSDTIRAMAQQLLQDPVSVQASPANAAAKTVRQLVYTTDKKAKPELLVHLARQ
QGWGQALIFAKTKKGVDQLVALLQDEGFSAEAIHGDRPQPARLQALNRFKARQVQLLVAT
DVAARGLDIQALPVVVNLDLPTVAEDYVHRIGRTGRAGAEGEAISLVAADEVELLRSIET
LIRQVLPRVEEPGFEANHRVPSTGTPARPAPAPRSAKSARPAAPNPAATAPRPAGGFEQA
PMAPPKAPRKPRPVAVPQGRTVVAAPRGAKAALKGRPKR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgcatcgctgcaactgatcgatccgctgctgcgcaccctggcggcactgggc
tacgacgaccccacccccgtgcagaagcaggccatccccgccgtgctggcgggccgcgac
ctgatggcggccgcgcagaccggcaccggcaagacggccggcttcgcgctgccgctgctg
cagcgcctgaccctggccggcgccgtcggcccgcacggcgtgcgctgcctggtgctggtg
ccgacccgcgagctggccgagcaggtctacgacagcttccgccgctacggcgccgcgctg
ccgctgcgcagcttcgtggcctacggcggcgtgccgctcgagccgcaggtgaacaagctg
cgcaagggcctggacgtgctggtggccacgcccggtcgcctgctcgacctgctgcgccag
ggcgcgctgacgttcgcccagctggaaaccctggtgctggacgaggccgaccgcatgctg
gacctgggctttgcggcggacctggacgcggtgttcgccgccctgcccgcgcagcgccag
accttgctcttctctgccaccttctcggacacgatccgcgccatggcgcagcaactgctg
caggatccggtatcggtccaggccagtcccgccaacgcggcggcgaagacggtgcgccaa
ctggtctacacgaccgacaagaaggccaagccggaactgctggtgcacctggcgcgccag
cagggctggggccaggcgctgatcttcgccaagacgaaaaagggcgtggaccagctggtc
gccctgctgcaggacgaaggtttcagtgccgaggcgatccacggcgaccggccgcaaccg
gcccggctgcaggcgctgaaccgcttcaaggcgcgccaggtgcagttgctggtggccacc
gacgtggcggcgcgcggcctggacatccaggccctgccggtggtcgtcaacctggacctg
cccacagtggccgaggattatgtgcaccgcatcgggcgcacgggccgtgccggtgccgag
ggtgaagcgatctcgctggtggcggcggacgaagtggagctgctgcgctccatcgagacg
ctgatcaggcaggtgctgccgcgcgtcgaggagccgggcttcgaggccaaccaccgggtg
ccgtcgaccggcacgccggccaggcccgcgcccgcgccccgctccgccaagtccgcgcga
ccggccgcgccgaatccggccgccacggccccccgccccgcgggcggtttcgaacaggcg
ccgatggcgccgccgaaagcgccccgcaagccgcgccctgtcgctgttccccagggccgt
acggtggtggccgcgccacggggcgccaaggcggcgctcaagggccggccaaaacgttag
DBGET
integrated database retrieval system
