Empedobacter haloabium: E7V67_014895
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Entry
E7V67_014895 CDS
T09755
Name
(GenBank) Y4yA family PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00300
Lysine biosynthesis
ehb00470
D-Amino acid metabolism
ehb01100
Metabolic pathways
ehb01110
Biosynthesis of secondary metabolites
ehb01120
Microbial metabolism in diverse environments
ehb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E7V67_014895
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E7V67_014895
Enzymes [BR:
ehb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E7V67_014895
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
WUR11007
LinkDB
All DBs
Position
complement(3423718..3425082)
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AA seq
454 aa
AA seq
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MQKPLVALLDQAVAALLHAEPRQLVALVEQHGSPLNVVWPHILRQNVDALRAVLRAHDVR
HEIFYGAKVNKSQALVRAAVQADAGVDVSSVYELRDALRAGVDPARVVATGPAKTRVFHA
ELLACGALISVDSCEELAALEAALAAPARARALARVLLRYRPESNRNSRFGMDATALQHC
LQRLAALRGAVTFEGFHCHLGGYAWETRVQAIRELAASVAAARELDLPPRMLDIGGGLPV
RYVDGDAYDEFLPAQEPADYRTGRVPTSYYPYGGRIDAATWLHNVLAAPIGDGRTVAQYL
NGERLALALEPGRSLVDQAAVTAFRVTQVKALADGKHVVFVEGSGFSACETWFGSEFLVD
PVLLPADPERAADGAPCAAQFAAYIAGHSCLDDDVITNRILDFDRRPAPGDLLVYANTAG
YQMDLLENEFHRHPMPRRIVVHVNARGAMEFSPD
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcccctggtagcgctgctggaccaggccgtggcggcgttgctgcatgccgag
ccacgccagctggtagccctggtcgagcagcacggttcaccgctgaacgtggtctggccc
cacatcctgcgccagaacgtcgacgcgctgcgcgccgtgctgcgcgcgcacgacgtgcgc
cacgaaatcttctacggcgccaaggtcaacaagtcgcaagcgctggtgcgcgcggcggtg
caggccgatgccggcgtggacgtctccagcgtgtacgaactgcgcgacgcgctgcgcgcc
ggcgtggacccggcccgcgtggtcgccaccggcccggccaagacgcgcgtcttccatgcc
gagctgctggcgtgcggcgcgctgatctcggtcgattcgtgcgaggaactcgccgcgctg
gaagcggcgctggcggcaccggcgcgtgcccgtgcccttgcccgtgtactgctgcgctac
cggccggagtccaaccgcaacagccgcttcggcatggacgcaacggcgctccagcactgc
ctgcaacgcctggcggccctgcgcggtgccgtcacgttcgaaggcttccactgccacctg
ggcggctacgcctgggaaacgcgcgtgcaggccatccgcgagctggccgccagcgtggcg
gcggcgcgcgaactggacctgccgccgcgcatgctcgacatcggcggcggcctgccggtg
cgctacgtggatggcgacgcctatgacgaattcctgccggcgcaggagccggccgactac
cgtaccggccgcgtgccgacgtcgtactacccgtacggtggccgcatcgacgcggccacc
tggctccacaacgtgctggcggcgccgatcggcgacggccggacggtggcgcagtacctg
aacggagagcggctggcgctggcgctggaaccgggccgcagcctggtggaccaggccgcc
gtgacggcgttccgcgtcacgcaggtgaaggcgctggccgacggcaagcacgtcgtcttc
gtcgaaggcagcggcttcagcgcctgcgagacctggttcggttccgagttcctggtcgat
ccggtcctgctgccggccgatccggagcgtgcggcggacggcgctccttgtgccgcgcag
tttgcagcctacatcgccggccacagctgcctggacgacgacgtcatcaccaaccgcatc
ctcgacttcgaccggcgccccgcgcccggcgacctgctggtgtacgccaacacggccggc
taccagatggacctgctcgaaaacgaattccaccgccatccgatgccgcgccggatcgtg
gtgcatgtcaacgcgcgcggcgccatggagttttcacccgactag
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