Empedobacter haloabium: E7V67_015015
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Entry
E7V67_015015 CDS
T09755
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00260
Glycine, serine and threonine metabolism
ehb00460
Cyanoamino acid metabolism
ehb00630
Glyoxylate and dicarboxylate metabolism
ehb00670
One carbon pool by folate
ehb00680
Methane metabolism
ehb01100
Metabolic pathways
ehb01110
Biosynthesis of secondary metabolites
ehb01120
Microbial metabolism in diverse environments
ehb01200
Carbon metabolism
ehb01230
Biosynthesis of amino acids
ehb01240
Biosynthesis of cofactors
ehb04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E7V67_015015 (glyA)
09102 Energy metabolism
00680 Methane metabolism
E7V67_015015 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E7V67_015015 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
E7V67_015015 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
E7V67_015015 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
E7V67_015015 (glyA)
Enzymes [BR:
ehb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
E7V67_015015 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WUR11031
UniProt:
A0ABZ1UDW1
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All DBs
Position
complement(3451078..3452349)
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AA seq
423 aa
AA seq
DB search
MFDRHHHTLAAIDPEIEAVIRRETLRQEEHIELIASENYTSPAVLAAVGSQLTNKYAEGY
PGKRYYGGCDIVDEAERLAIARLRSLFGAESVNVQPHSGSQANQAVFFAALKPGDTILGM
SLAEGGHLTHGMPLNISGKWFNVHSYGLNEAEEIDYDAMERTAHAVRPKMIIAGASAYSL
RIDFERFARVARDVGAYFMVDMAHYSGLIAGGQYPNPVPHADFVTSTTHKGLRGPRGGVI
LMKEQHEKAVNSAIFPGTQGGPLMHVIAGKAVAFKEALAPSFRLYQEQVLANAAAMAEAL
RQRGLRIVSNRTESHLMLVDLRGAGITGRDAERILGDVCITCNKNSIPNDPEKPVVTSGI
RLGSPAITTRGFGVAEARLVGNLVADVLQAPTHAPTLARVHEQVRALCRDFPVYGPVHGP
VHG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatcgtcaccaccacaccctagccgccatcgatcccgagatcgaggccgtcatc
cggcgcgaaacgctgcgccaggaggaacacatcgaactcatcgcatcggagaactacacg
tcgccggccgtgctggccgccgtgggatctcagctcaccaacaagtatgcggaaggctat
ccgggcaagcgctactacggcggctgcgacatcgtcgacgaggcggagcgcctggccatc
gcgcgcctgcgcagcctgttcggcgccgagagcgtcaatgtgcagccgcactccggttcg
caggcgaaccaggcggtattctttgccgccctgaagccgggcgacaccatcctcggcatg
agcctggccgaaggcggccacctgacgcacggcatgccgctcaatatcagcggcaaatgg
ttcaacgtgcacagctatggcctgaacgaagccgaggaaatcgactacgacgccatggag
cgcacggcgcacgcggtgcgcccgaagatgatcatcgccggtgcttcggcgtattcgctg
cgcatcgatttcgagcgcttcgcccgggtggcgcgcgatgtcggcgcctacttcatggtg
gacatggcgcattactccggcctgatcgccggcggccagtacccgaacccggtaccgcac
gccgacttcgtcacgtccaccacccacaagggcctgcgcgggccgcgcggcggtgtgatc
ctgatgaaggagcagcacgagaaggccgtcaactcggccatcttcccgggcacgcaaggc
gggccgctgatgcacgtgatcgccggcaaggccgtggcgttcaaggaagcgctggcgccg
tcgttccggctgtaccaggagcaggtgctggccaacgccgccgcgatggccgaggccctg
cggcagcgcggcctgcgcatcgtatcgaaccgcaccgaaagccacctgatgctggtggac
ctgcgcggcgccggcatcacgggccgggatgccgagcgcatcctgggcgacgtctgcatc
acctgcaacaagaactcgatcccgaacgacccggaaaagccggtcgtgaccagcggcatc
cgcctgggcagcccggccatcaccacgcgcggcttcggcgtggccgaggcgcgcctggtc
ggcaacctggtggcggacgtgctgcaggcgcccacccacgcgccgacgctggcgcgggtg
cacgagcaggtgcgggccctgtgccgcgacttcccggtttatggccccgttcatggcccc
gttcatggctga
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