Empedobacter haloabium: E7V67_015570
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Entry
E7V67_015570 CDS
T09755
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00260
Glycine, serine and threonine metabolism
ehb00630
Glyoxylate and dicarboxylate metabolism
ehb00670
One carbon pool by folate
ehb00785
Lipoic acid metabolism
ehb01100
Metabolic pathways
ehb01110
Biosynthesis of secondary metabolites
ehb01200
Carbon metabolism
Module
ehb_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E7V67_015570 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
E7V67_015570 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
E7V67_015570 (gcvP)
00670 One carbon pool by folate
E7V67_015570 (gcvP)
Enzymes [BR:
ehb01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
E7V67_015570 (gcvP)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
WUR11138
LinkDB
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Position
3579341..3582235
Genome browser
AA seq
964 aa
AA seq
DB search
MTRTSLTQLEARDAFIARHIGPDAAEQQQMLDTLGYASRAALIDAIVPAHIRNRAALPLG
QFSEPKPEQEALAVLKGLAKKNQVLTSLIGQGYYGTITPGVVLRNIFENPAWYTAYTPYQ
PEISQGRLEAILNFQQAITDLTGMGIANASMLDEGTSAAEAMTLLMRVGKSKSKTFAVAS
DVLPQTLEVVRTRAEPLGIEVKTFDPAELAGVTDAFGVLLQYPGVDGAVRDYRADVEKVK
ANGTMVVVAADLLALTLLTPPGEWGADVVVGNSQRFGVPLGFGGPHAGYMATRDEYKRSM
PGRLVGVTVDQQGNTAYRLALQTREQHIRREKATSNICTAQVLLAVIASMYAVYHGPQGL
KNIAQRVHRYTGVLASYLRTLGYSLTSESYFDTLTIRTDNADALHAAAVANGINLRKIDA
RHVGVSLDETTDRNTLAALWTVFAGKGDATPAAPDFAAVEAEVNQAFPEALARSSDYLTH
PVFNRYHSETEMLRYLRSLADKDLALDRTMIPLGSCTMKLNATSEMIPVTWPEFSNIHPF
APNDQTVGYREMIDQLEQMLCAVTGYAAVSLQPNAGSQGEYAGLLVIQKYHQSRGEGHRN
ICLIPSSAHGTNPASASMVNMQVVVTACDENGNVDLADLKAKAEQHSKNLACVMVTYPST
HGVFEEGIKELCDIVHAHGGQVYIDGANMNALVGVAAPGAFGGDVSHLNLHKTFCIPHGG
GGPGVGPIGVGAHLAEFLPNQRSTGYARNDNGIGAVSAAAYGSASILPISWMYIAMMGAA
GLTAATETAILNANYIARRLAPHYPVLYSGHDGLVAHECILDLRPLTDATGISNEDVAKR
LMDFGFHAPTMSFPVPGTLMIEPTESESKAELDRFIDAMIAIRGEIAKVESGEFDKANNP
LKFAPHTAEVLTADNWDRQYSRETAAYPLPSLRKNKYWPTVGRADNVYGDRNLMCGCAPI
SAYE
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcaccagcctgacccaactcgaagcccgcgatgcgttcatcgcccgccatatc
ggcccggacgccgccgaacaacagcagatgctcgacaccctcggctacgcctcgcgcgcc
gcgctgatcgacgccatcgtgccggcccacatccgcaaccgtgccgccctgcccctcggc
cagttcagcgagccgaagccggagcaggaagcgctggccgtgctgaagggtctggcgaag
aagaaccaggtgctgacctccctgatcggccagggctattacggcacgatcacgcccggc
gtggtgctgcgcaatatcttcgagaacccggcctggtacaccgcctacaccccgtaccag
ccggagatctcgcaaggccgcctggaagcgatcctgaacttccagcaggccatcacggac
ctgaccggcatgggcatcgccaacgcgtcgatgctggacgaaggcacgtcggccgccgag
gcgatgacgctcctgatgcgcgtcggtaaatcgaagtcgaagaccttcgccgtggccagc
gacgtgctgccgcagaccctggaagtggtgcgcacccgcgccgagccgctgggcatcgaa
gtgaagacgttcgacccggccgaactggccggcgtgacggacgccttcggcgtgctgctg
cagtacccgggtgtcgacggcgccgtgcgcgactaccgcgccgacgtcgaaaaagtaaag
gccaacggcaccatggtcgtggtggcggccgacctgctggcactgacgctgctcacgcca
ccgggcgaatggggcgcggacgtcgtggtcggcaacagccagcgcttcggcgtgccgctg
ggcttcggcggcccgcacgccggctacatggccacgcgcgacgaatacaagcgctcgatg
ccgggccgcctggtcggcgtcaccgtcgaccagcagggcaacaccgcctaccgcctggcg
ctgcagacgcgcgaacagcacatccgccgcgaaaaagccacctccaacatctgcaccgcg
caggtgctgctggccgtgatcgcgtcgatgtacgccgtctaccacggcccgcagggcctg
aagaacatcgcccagcgcgtgcaccgctacaccggcgtgctggcctcgtatctgcgtacg
ctgggctactcgctgaccagcgagtcgtacttcgacacgctgacgatccgcaccgacaac
gccgatgcgctgcacgcggcggcggtcgccaacggcatcaacctgcgcaagatcgatgcg
cgccacgtcggcgtgtcgctggacgagaccaccgaccgcaatacgctggccgcgctgtgg
accgtgttcgccggcaagggtgacgcaaccccggccgcgccggacttcgccgccgtcgag
gcggaagtgaaccaggccttccccgaagcgctggcccgctccagcgactacctgacgcac
ccggtcttcaaccgctaccacagcgagacggaaatgctgcgctacctgcgcagcctggcc
gacaaggacctggcgctggaccgcaccatgatcccgctgggctcctgcacgatgaaactg
aacgccaccagcgagatgatcccggtgacgtggccggagttctccaacatccacccgttc
gcgccgaacgaccagacggtcggctaccgcgagatgatcgaccagctggaacagatgctg
tgcgccgtcaccggctatgcggccgtgtcgctgcagccgaacgccggctcgcagggcgaa
tacgcgggcctcctggtgatccagaagtaccaccagtcgcgcggcgaaggccaccgcaac
atctgcctgatcccgtcctccgcgcacggcaccaacccggcttcggcctcgatggtcaac
atgcaggtggtggtgacggcctgcgacgagaacggcaacgtcgacctggccgacctgaag
gccaaggccgaacagcacagcaagaacctggcgtgcgtgatggtcacctacccgtccacc
cacggcgtgttcgaggaaggcatcaaggaactgtgcgacatcgtgcacgcgcacggcggc
caggtctacatcgacggcgccaacatgaacgcgctggtcggcgtggccgcgccaggcgcg
ttcggcggcgacgtctcgcacctgaacctgcacaagaccttctgcatcccgcacggcggc
ggcggcccgggcgtcggcccgatcggcgtgggcgcgcacctggccgagttcctgccgaac
cagcgttcgaccggctatgcccgcaacgacaacggcatcggcgccgtctcggcggcggcc
tacggctcggcctcgatcctgccgatctcgtggatgtacatcgcgatgatgggcgcggcc
ggcctgacggcggccacggaaacggcgatcctgaacgccaactacatcgcccgccgcctg
gcgccgcattatccggtgctgtattcgggccatgacggcctggtggcgcacgagtgcatc
ctggacctgcgcccgctgacggacgccaccggcatcagcaacgaggacgtggccaagcgc
ctgatggacttcggcttccacgcgccgaccatgagcttcccggtgccgggcaccttgatg
atcgagccgaccgagtcggaatcgaaggcggagctggaccgcttcatcgacgcgatgatc
gccatccgcggcgagatcgccaaggtggaaagcggcgaattcgacaaggccaacaacccg
ttgaaatttgcgccgcacaccgccgaggtactcaccgccgacaactgggatcgccagtac
agccgcgaaacggcggcctacccgctgccgtcgctgcgcaagaacaagtactggccgacc
gtgggccgtgccgacaacgtgtatggcgaccgtaacctgatgtgcggctgcgcgccgatc
agcgcctacgaataa
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