Empedobacter haloabium: E7V67_016210
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Entry
E7V67_016210 CDS
T09755
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E7V67_016210 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_016210 (recD)
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E7V67_016210 (recD)
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E7V67_016210 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
UvrD_C_2
SH3_13
Viral_helicase1
Helicase_RecD
PhoH
AAA_22
UvrD-helicase
AAA_16
SLFN-g3_helicase
DEAD
AAA_25
nSTAND3
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WUR11255
LinkDB
All DBs
Position
complement(3718672..3720684)
Genome browser
AA seq
670 aa
AA seq
DB search
MKKNATDPQAEMARSAATLAQLDALTEAGKLRRLAGAFARFVATLGQAPAPLLVAGALLS
ELEGRGHSCLVLADLAHDPSAQLGWLDGEWAALRAVAGPLPKKAADWRNLLQACEQVWPV
GDLDFNQPLVLDGERLYLRRYWRDETMVAASVLRRAGTERPVDAAAVRRWLDRLFEPRDD
ARADAAGPDWQKIACAIALRSELAIITGGPGTGKTYTVARLLALLFAMAGAGQAHGLRIA
LAAPTGKAAARLKQSIDQALDELADKLGDTLPLRELAARMGAARTLHSLLGARPDTRSFA
YHAGNPLDVDVLIVDEASMVHLEMMASLLAALPAHARLILLGDKDQLASVEAGAVLGDLC
AEAESGNYAEDTVAYVQAATGETIPADYALRDGGALAQSIVMLRQSRRFGGPIGALALAV
NRGDGDAARAVLRAGPDEHGGRVHWIEGATPPDALALAVEGRAGAPQGYRDYLTLVQEGP
EAWGSDYTGWVRAVLRRFEQFRLLCAVRAGEWGVAGLNEAIEARLDAARLIRRRGEWYVG
RPVMVTRNDYATGVYNGDIGLTLPDPQRPGSLRVWFADGDAIRSVLATRLRDVETAFAMT
VHKSQGSEFTHTAMVLPREMNAVLARELVYTGITRAREFFTLVSPNAAVLGQAIAERTQR
ASGLREALLR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaacgccaccgatccccaggccgagatggcacgatccgccgccacgctggcg
cagctggatgcactgaccgaggcgggcaagctgcgccgcctggccggcgcgttcgcccgc
ttcgtcgcgacgctgggccaggcaccggcgccgctgctggtggccggcgcgctgctgtcc
gagctggaagggcgcggccacagctgcctggtgctggccgacctggcgcacgacccgtcg
gcgcaactgggctggctcgatggcgagtgggcggcgctgcgcgcggtggccggcccgctg
ccgaagaaggcggccgactggcgcaacctgctgcaggcctgcgaacaggtgtggccggtg
ggcgacctggatttcaaccagccgctggtgctcgacggcgaacggctgtacctgcgccgc
tactggcgcgacgagaccatggtggcggcctccgtgctgcgccgcgccggcaccgaacgc
ccggtcgatgcggccgccgtgcggcgctggctggaccggctgttcgagccgcgtgacgat
gcgcgtgccgatgcggcgggcccggactggcagaagatcgcctgcgccatcgcgctgcgc
agcgagctggccatcatcacgggcggtccgggcaccggcaagacctacacggtggcacgc
ttgctggccctgctgttcgccatggccggcgcaggtcaggcgcacggcctgcgcatcgcg
ctggcggcgcccaccggcaaggcggccgcgcgcctgaagcagtcgatcgaccaggccctg
gacgagctggcggacaagctgggcgacacgctgccgctgcgcgaactggccgcgcgcatg
ggcgccgcccgcaccctgcactcgctgctgggcgcacggccggacacgcgcagcttcgcc
taccacgccggcaatccgctcgacgtggacgtgctgatcgtcgacgaagcctcgatggtg
cacctggaaatgatggcgtccctgctggcggcgctgccggcgcacgcgcgcctgatcctg
ttgggcgacaaggatcaattggcatcggtggaggcgggcgccgtgctgggcgacctgtgc
gccgaggcggaaagcggcaactacgccgaggacacggtcgcctacgtgcaggccgccacc
ggcgagaccatcccggcagactacgcgctgcgcgacggcggcgcgctggcgcaaagcatc
gtcatgctgcgccagagccgccgcttcggcggtccgatcggcgcgctggcgctggccgtc
aaccggggcgacggcgacgccgcccgcgccgtgctgcgcgccgggccggacgaacacggc
ggccgcgtgcactggatcgaaggcgctaccccgccggacgcgctggcgctggcggtcgag
gggcgcgccggcgcgccgcagggctaccgcgattacctgacgctggtgcaggaaggaccg
gaggcctggggcagcgactacacgggctgggtgcgcgcggtgctgcgccgcttcgagcag
ttccgcctgctgtgcgccgtgcgcgcgggcgagtggggcgtggccggcctgaacgaagcg
atcgaggcgcgcctggacgcggcccggctgattcgccgccgtggcgagtggtacgtcggc
cggccggtcatggtcacgcgcaacgactacgccaccggcgtgtacaacggcgacatcggc
ctgaccctgccggacccgcagcggcccggctcgctgcgcgtgtggttcgccgacggcgat
gcgatccgcagcgtgctggccacgcgcctgcgcgacgtggagacggcgttcgcgatgacg
gtgcacaaatcgcagggctcggaattcacccacacggcgatggtgctgccgcgcgagatg
aacgccgtgctggcgcgcgagctggtctacaccggcatcacgcgggcgcgcgagttcttc
acgctggtgtcgccgaacgcggccgtgctgggccaggccattgccgagcgcacgcagcgc
gccagtggcttgcgcgaggccttgttgcggtag
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