Empedobacter haloabium: E7V67_016215
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Entry
E7V67_016215 CDS
T09755
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
E7V67_016215 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_016215 (recB)
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
E7V67_016215 (recB)
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E7V67_016215 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WUR11256
LinkDB
All DBs
Position
complement(3720681..3724373)
Genome browser
AA seq
1230 aa
AA seq
DB search
MSDDIQGTPLLDALTFPLHGSRLIEASAGTGKTWTIAALYVRLVLGHGGEHGYLRPLLPA
DILVMTFTRAATRELSNRVRERLVEAAAYFRGQADGGDPYLDALLDAYPDHGARQQAAHR
LMLAAETMDEAAIFTIDSWCQRMLREHAFDSGSLFDEELVSDEAALFEDAAHDYWRQQVY
PLREPALGALLACWPDVGRLKASLRDLVKRADGSWHRDGDGQPVALGTLIGSALHELQER
LGALKAGWIERIERMEIWLEEKKDAGLLNGRKIQMKWLAGWFGSLRGWVADPARVDPEMA
AAGWHRLSPEGIAEAYEGSDVPAEFAELRQLKDDLAGIEPLAHRLYRHAAAVIAARMGEL
KRRNRQFGFADMLLRLQHALEGGNGAALRERITQQYPVALVDEFQDTAPSQYRIFDLLYR
VADNEPNLGLFLIGDPKQSIYGFRGADIHSYLAARRATAGRHYQLGTNYRSTREVVEAVN
RIFLHAERLAGDKGFDKGAFRFRSGAVNPLPFDPVDAKGRPERLVGVDGQLQALTVACAD
APDLRADAYRDFFAHHCAEHIVELLNHPGTGFEGPDGLRRLQPADIAILVRDRKEAKAIR
DALRRRRVPSVYLSDKDSVLDSDEARDVLRWLTALANPLDGNLARAAFATRTANLPLAEL
ARFSADELAWEARTEQLKALHTVWQRQGVLAMLRRFIHELGLPAALLAQPGGERRLTNLL
HLAELLQSASRQLDGEQALIRWMAEQVEGEGDNSDEQVLRLESDAELVKVVTVHKSKGLE
YPLVYLPFAVTARKVERRNRSFFEYTDGDGVRRIDMALSDDAHAAVEAARIEEELRLLYV
ALTRARHFLWLGVAALPAKAKGANVLHESALGYLLTGGAPLPADALQERWQHLRGDCAAI
GIASAGAPERVTLLNRVEHKPPLLEAAPFDAQFERDWSVGSFTSLTRGVQVEVPVPVPRD
ALEATLLEGEDGDPAASGAAVQEAPWHRFPRGSVPGNFLHEQLEWLAQEGFDSIHDAGFD
ARIGRRIERAGWGHRLEDTIAWLRELVVTHLPPLGAALQDVGMLLPEMEFWFPSERLATG
ALDALCRRHLLDGMARPPLPQRALHGMLKGFSDLVFEHAGRYWVLDYKSNALGNRDSAYH
AAALAHGMAEHRYDVQGAIYLLALHRLLRSRLGEAYQPARHLGGAVFWFLRGVGNTATRG
CHLIGPDEALLDGLDALLHAGAPDTTMDEQ
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgacatccaaggcacgccgctgctggacgcgctgacgtttccgctgcacggc
tcgcgcctgatcgaggccagcgccggcacgggcaagacgtggaccatcgccgcgctgtac
gtgcgcctggtgctgggccatggcggcgagcatggctacctgcggccactgctgccggcc
gacatcctggtgatgacgttcacccgcgccgccacgcgcgagctgtccaaccgcgtgcgc
gagcggctggtggaggccgccgcctacttccgcggccaggccgacggcggcgatccctac
ctcgacgcgctgctcgatgcgtaccccgaccacggcgcgcgccagcaggccgcgcaccgc
ctgatgctggcggccgagacgatggacgaagcggccatcttcacgatcgactcgtggtgc
cagcgcatgctgcgcgagcacgccttcgacagcggcagcctgttcgacgaggaactggtc
agtgacgaggcggccctgttcgaggacgcggcgcacgactactggcgccagcaggtctat
ccgctgcgcgaaccggcgctgggcgcgctgctggcatgctggccggatgtgggccgcctg
aaggccagcctgcgcgacctggtgaagcgcgccgacggctcgtggcaccgcgacggcgac
ggccagccggtcgcactgggcaccctgatcggcagcgcgctgcacgagctgcaggagcgc
cttggcgcgctgaaggcgggctggatcgagcgcatcgagcggatggagatctggctggag
gaaaagaaggacgccggcctgctgaacgggcgcaagatccagatgaaatggctggccggc
tggttcggcagcctgcgcggatgggtggcggaccccgcccgcgtcgatccggagatggcg
gcggcgggctggcaccgcctgtcgccggagggcatcgccgaggcctacgagggcagtgac
gtgccggccgaatttgccgaattgcgccagctcaaggacgacctggccggcatcgagccg
ctggcgcaccgcttgtaccgccacgccgccgccgtgatcgcggcacggatgggggaactg
aagcggcgcaaccgtcagttcggctttgccgacatgctgctgcggctgcagcacgcgctg
gagggcgggaacggcgcggcgctgcgcgaacgcatcacccagcagtacccagtggcgctg
gtggacgagttccaggacacggcgcccagccagtaccgcatcttcgacctgctgtaccgc
gtggcggacaacgagccgaacctgggcctgttcctgatcggcgacccgaagcagtcgatc
tacggcttccgcggcgcggacatccacagctacctggccgcgcggcgcgccaccgccggc
cgccactaccagctgggcaccaactaccggtccacccgcgaggtggtggaagcggtcaac
cgcatcttcctgcacgccgagcggctggccggcgacaagggcttcgacaagggcgcgttc
cgcttccgctccggcgccgtcaatccgctgccgttcgatccggtcgacgcgaaggggcgg
ccggaacgcctggtcggcgtggacggccagttgcaggcgctgacggtggcctgcgcggat
gcgccggacctgcgcgccgacgcctaccgcgattttttcgcgcaccactgcgccgagcac
atcgtcgagctgctgaaccatcccggcacgggcttcgagggtccggacggcttgcgccgc
ctgcagccggccgacatcgccatcctggtgcgcgaccgcaaggaagcgaaagcgatccgc
gacgcgttgcggcggcggcgcgtgcccagcgtctacctgtccgacaaggattcggtgctg
gacagcgacgaggcgcgcgatgtgctgcgctggctgaccgcgctggccaatccactggac
ggcaatctggcgcgcgccgccttcgccacgcgcacggccaacctgccactggccgagctg
gcacgcttctcggccgacgagctggcgtgggaagcgcgcaccgagcagctcaaggccctg
cataccgtgtggcagcgccagggcgtgttggccatgctgcgccgcttcatccacgaactg
gggctgccggccgccttgctggcgcagccgggcggggaacgccggctgaccaacctgttg
cacctggccgaactgctgcagtcggccagccgccagctcgatggcgagcaggccctgatc
cgctggatggccgagcaggtcgagggcgaaggcgacaacagcgacgagcaggtgctgcgg
ctggagtcggacgccgagctggtcaaggtcgtcaccgtgcacaagtcgaaaggcctggag
tacccgttggtgtacctgccgttcgccgtcaccgcgcgcaaggtcgagcggcgcaaccgc
agcttcttcgagtacaccgacggcgatggcgtgcgccgcatcgacatggcgctgtccgac
gacgcccatgcggcggtggaagcggcccgcatcgaggaggagctgcgcctcttgtacgtg
gcgctgacgcgggcgcgccacttcctgtggctgggcgtggccgcgctgccggccaaggcc
aaaggcgccaacgtgctgcacgaatcggcgctgggctacctgctgaccggcggcgcgccg
ctgccggccgatgcgctgcaggaacgctggcagcatttgcgcggcgactgcgccgccatc
ggcatcgccagtgccggcgcgcccgagcgggtcaccttgctgaaccgcgtcgagcacaaa
ccaccgctgctggaggcggcgccgttcgacgcccagttcgagcgcgactggtcggtcggc
agcttcacgtcgctgacgcgtggcgtccaggtcgaggtaccggtgccggtgccgcgcgac
gcgctggaggcgacgctgctggagggcgaggacggcgacccggccgcgagcggcgcggcg
gtgcaggaagcaccatggcaccgtttcccgcgcggttccgtgcccggcaacttcctgcac
gagcagctggaatggctggcgcaggaaggcttcgacagcattcatgatgccggcttcgac
gcccgcatcggccgccgcatcgagcgcgccggctggggccaccggctggaggacacgatc
gcctggctgcgcgaactggtcgtcacgcacttgccgccgctgggcgcggcactgcaggac
gttggcatgctgctgccggagatggagttctggttccccagcgagcgcctggccaccggc
gcgctggacgcgctgtgccggcgccacctgctggatggcatggcccgcccaccgctgccg
cagcgcgcgctgcacggcatgctgaagggcttttccgacctggtgttcgagcacgcaggg
cgctactgggtgctggactacaaatcgaatgcgctgggcaaccgcgacagcgcctaccac
gcggcggcgctggcgcacggcatggccgagcaccgctacgacgtgcagggcgcgatctac
ctgctggcgctgcaccggctgctgcgcagccggctgggcgaggcgtaccagccggcgcgg
cacctgggcggcgccgtgttctggttcctgcgcggcgtcggcaatacggcgacgcgcggc
tgccacctgatcggcccggacgaagcgttgctggacggcctggacgcgctgctgcacgcc
ggcgcgcccgacaccacgatggacgagcaatga
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