Empedobacter haloabium: E7V67_016275
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Entry
E7V67_016275 CDS
T09755
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E7V67_016275 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_016275 (xth)
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
E7V67_016275 (xth)
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
E7V67_016275 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WUR11268
UniProt:
A0ABZ1UGI7
LinkDB
All DBs
Position
complement(3738240..3739175)
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AA seq
311 aa
AA seq
DB search
MRIATFNVNGIGSRLPALLQWLEEKQPDVACLQELKAPQEKFPLEAIRAAGYEAIWHGQK
SWNGVAILAKGTMPQEIGRGLPGDPEDEQSRYIEAVVHDVVIACLYLPNGNPAPGPKFDY
KLKWFERLIRRGEQLLATGAKVVMAGDFNVMPTELDVYKPERWVDDALFRPETREAFHRL
VAQGWTDALRTLHPGEKIYTFWDYFRNAYGRDAGLRIDHLLLSPALAPALQAAGVDRDVR
GREKPSDHAPTWIELDLAAAGQGKAAAAPDAVPVKATAARKTAARKTAAKPAVDSPTAAP
ARRKTKSEPAA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgctacattcaacgtcaacggcatcggcagccgcctgccggccctgttgcag
tggctggaagagaaacagccggacgtcgcctgcctgcaggagctgaaggcgccgcaggaa
aagttcccgctggaagccatccgcgcggccggttacgaggcgatctggcacggccagaaa
agctggaacggtgtcgccatcctggccaagggcaccatgccgcaggagatcggccgtggc
ctgccgggcgacccggaggacgagcagagccgctacatcgaggcggtcgtgcacgacgtc
gtgatcgcctgcctgtatctgccgaacggtaacccggcgccgggaccgaagttcgactac
aagctgaaatggttcgagcgcctgatccggcgtggcgagcaactgctggccacgggcgcg
aaggtggtgatggcgggcgacttcaacgtgatgccgaccgagctcgacgtctacaagccg
gagcgctgggtggacgatgcgctgttccgtccggaaacgcgggaggcttttcaccgcctg
gtcgcgcagggctggaccgacgcgctgcggaccctgcatccgggcgaaaagatctacacc
ttctgggattacttccgcaatgcctatggccgcgatgccggcctgcgcatcgaccatttg
ctgctcagtcctgccctggcaccggcgctgcaggcggccggcgtggaccgcgacgtgcgc
gggcgcgaaaagcccagcgaccatgcgccgacctggatcgaactcgatctggcggcggca
gggcagggcaaggcggcagccgccccggacgcagtgcccgtcaaggcaacggctgcgcgc
aagacggctgcgcgcaagacggcggcaaagccggccgtggactctccaaccgccgcgccg
gccaggcgcaagacgaaaagcgagccggccgcctag
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