Empedobacter haloabium: E7V67_016485
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Entry
E7V67_016485 CDS
T09755
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00630
Glyoxylate and dicarboxylate metabolism
ehb00680
Methane metabolism
ehb01100
Metabolic pathways
ehb01120
Microbial metabolism in diverse environments
ehb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
E7V67_016485 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
E7V67_016485 (fdhF)
Enzymes [BR:
ehb01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
E7V67_016485 (fdhF)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4_21
Fer4_9
Fer4_8
Fer4_17
Fer4
Fer4_10
Fer4_6
Fer4_22
Fer4_2
Fer4_4
Fer4_16
SIS
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
WUR11310
LinkDB
All DBs
Position
complement(3780322..3783108)
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AA seq
928 aa
AA seq
DB search
MIGFQLNGCDVQARPGETLLDVARREGIAVPHLCYKDGLAPAGNCRACVVEVEGERTLAP
SCCRAPLPGMKVETASPRARAAQKMVLELLQSDLAEATYTRHNEVDEWAARLQVGKPRFA
PRAQPARDASHAAITVNLDACIQCTRCVRACRDEQANDVIGLALRGDAAKIVFDMDDPMG
ASTCVACGECVQACPTGALAPARGAAMAVPDRQVASVCPFCGVGCQLTYNVQGNRIVSVE
GRDGPANHGRLCVKGRYGFDYAHHPQRLTRPLIRRADAPKSATMAMDPTRVLEVFREASW
EEALALAGGGLARIRDQSGRKALAGFGSAKGSNEEAYLFQKLVRTGFGSNNVDHCTRLCH
ASSVAALLEGIGSGAVSNPVMDVLQAEVVLVIGANPTVNHPVAATWIKNAVRNGTKLILC
DPRRSELARHAHRTLQFKPDTDVALLNAMMHVIVAEGLADQAFIASRTSGYEALAANVAQ
YSPEAMAPLCGIDAETIRYVARLYATSKGSMILWGMGVSQHVHGTDNARCLIALALLTGQ
IGRPGTGLHPLRGQNNVQGASDAGLIPMMYPDYQRVTEASVRERFAQAWNVPAALLDDQP
GLTVVEVMEAILAGTVKGMYIMGENPAMSDPDANHAREALAALDLLVVQDIFLTETAYLA
DVILPASAFPEKTGTFTNTDRLVQLGRQAIEPPGEARQDLWIICELARRLGLDWHYDHVA
QVFDEMRRLMPSMAGITWQRLERDGAVVHPCPEEAHPGTPVVFTDTFPRPDGKARFVPAD
IIPANERPDAEYPMVLITGRQLEHWHTGSMTRRATVLDALEPDPVALIHPLDLAELGVAP
GGVVTLASRRGSVALYARADEASPRGAVFVPFCYYEAAINRLTNAALDPYGKIPEFKYCA
VRLTAGGTVEAQGSYGGGQMLQRLEQPA
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgatcggctttcaactgaacggttgcgacgtgcaggcgcgccccggcgagacgctgctg
gacgtggcgcggcgcgagggcatagccgtgccacacctgtgctacaaggatggcctggcg
ccggccggcaactgccgcgcctgcgtggtcgaggtcgagggcgaacgcaccttggcaccg
tcgtgctgccgcgcgccgctgcccggcatgaaggtggagacggccagcccgcgcgcccgg
gcggcgcagaagatggtgctggagctgctgcagtccgacctggccgaggcgacgtacacg
cgccacaacgaggtggacgagtgggccgcccgcctgcaggtgggcaagccgcgcttcgcg
ccgcgcgcccagccggcccgcgacgccagccacgccgccatcaccgtcaacctggatgcc
tgcatccagtgcacccgctgcgtgcgcgcctgccgcgacgagcaggccaacgacgtgatc
ggcctggcgctgcgcggcgacgccgccaaaatcgtgttcgacatggacgatccgatgggc
gcctccacctgcgtggcctgcggcgaatgcgtgcaggcctgtcccaccggggcgctggcg
ccggcgcgcggcgccgcgatggccgtgccggaccgccaggtggcgtctgtctgcccgttc
tgcggcgtgggctgccagctgacctacaacgtgcagggcaaccgcatcgtctcggtggag
gggcgcgatggtccggccaaccacggccgcctgtgcgtcaagggccgctacggcttcgat
tacgcgcaccatccgcagcggctgaccaggccgctgatccggcgtgccgacgcgccgaag
tcggccacgatggcgatggacccgacccgggtgctggaagtgttccgcgaagcgagctgg
gaagaggcgctggcattggccggcggcggcctggcgcgcatccgcgaccagtccggccgc
aaggcactggccggcttcggctcggccaagggcagcaacgaggaagcctacctgttccag
aaactggtgcgcacgggcttcggcagcaacaacgtcgaccactgcacgcggctgtgccac
gcctcctcggtggcggccctgctggaagggatcggctcgggcgcggtgtcgaatcccgtg
atggacgtgctgcaggccgaggtggtgctcgtcatcggcgccaaccccaccgtcaatcat
ccggtggcggcgacctggatcaagaacgcggtgcgaaacggcacgaagctgatcctgtgc
gacccgcgccgctccgagctggcgcgccatgcccaccgcaccttgcagttcaagcccgat
accgatgtggcgctgctgaacgcgatgatgcacgtgatcgtggccgaaggcctggccgac
caggccttcatcgccagccgcaccagcggctacgaggcgctggccgccaacgtggcgcag
tacagcccggaggcaatggcgccgctgtgcggcatcgacgcggagacgatccgctacgtg
gcgcggctgtatgccacctcgaagggctcgatgatcctgtggggcatgggggtatcgcag
cacgtgcacggcaccgacaacgcgcgctgcctgatcgcgctggcgctgctgacgggccag
atcggccgccccggcaccgggctgcatccgctgcgcggccagaacaacgtgcagggcgcc
tccgacgccggcctgatcccgatgatgtatccggactaccagcgcgtgacggaagcgagc
gtgcgcgagcgcttcgcccaggcctggaacgtgccggccgcgctgctggacgaccagccc
ggcctgacggtggtggaggtgatggaggcgatcctggccggcacggtcaagggcatgtac
atcatgggcgagaatccggccatgtccgatccggacgcgaaccacgcgcgcgaggcgctg
gccgcgctcgacctgctggtggtgcaggacatcttcctgaccgaaacggcctacctggcc
gacgtgatcctgccggccagcgcattcccggaaaagaccggcaccttcaccaataccgac
cggctggtgcagctgggccgccaggccatcgagccgccgggcgaggcgaggcaggatctg
tggatcatctgcgagctggcgcgccgcctcggcctggactggcattacgatcacgtggcg
caagtgttcgacgagatgcgccgcctgatgcccagcatggccggcatcacctggcagcga
ctggagcgcgatggcgcggtcgtgcatccatgtccggaagaagcgcaccccggcacgccg
gtcgtgttcacggacacgttcccgcgcccggacggcaaggcgcgcttcgtcccggcggac
atcattccggccaacgaacgccccgatgccgagtatccgatggtgctgatcacgggccgc
cagctggagcactggcacaccggcagcatgacgcgccgcgcgacggtactggatgcgctg
gagccggacccggtggcgctgattcatccgctcgacctggccgaactgggggtggcgccc
ggcggtgtcgtcacgctggcctcgcgccgcggcagcgtggcgctgtatgcgcgggcggac
gaggcgtcgccgcgcggcgccgtgttcgtgccgttctgctattacgaggcggcgatcaac
cggctgaccaacgccgcgctggacccgtacggcaagatcccggagttcaagtactgtgcg
gtgcgcctgacggccggcggtacggtggaggcgcagggcagctacggcggcggccagatg
ctgcagcggctggagcaaccggcatga
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