Empedobacter haloabium: E7V67_017195
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Entry
E7V67_017195 CDS
T09755
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E7V67_017195 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehb03019
]
E7V67_017195 (rnc)
03009 Ribosome biogenesis [BR:
ehb03009
]
E7V67_017195 (rnc)
03036 Chromosome and associated proteins [BR:
ehb03036
]
E7V67_017195 (rnc)
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
E7V67_017195 (rnc)
Messenger RNA biogenesis [BR:
ehb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E7V67_017195 (rnc)
Ribosome biogenesis [BR:
ehb03009
]
Eukaryotic type
90S particles
RNase
E7V67_017195 (rnc)
Prokaryotic type
rRNA processing factors
E7V67_017195 (rnc)
Chromosome and associated proteins [BR:
ehb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
E7V67_017195 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
WUR11442
UniProt:
A0ABZ1UFH0
LinkDB
All DBs
Position
complement(3956318..3957106)
Genome browser
AA seq
262 aa
AA seq
DB search
MNLQLLQTRLGHTFKDAGLLQQALTHRSHSSLHNERLEFLGDSILNCVVASILYERYLAI
DEGDLSRLRANLVKQQSLYEIAQKLDLSQFLRLGEGELKSGGFRRPSILADTLEALLGAI
FLDAGFDAAATVIRAFYIPILDSVDPRTLGKDAKTLLQEFLQSKKISLPLYNVVATHGAA
HSQEFEIECLVPKLGIQVYGRGGSRRAGEQAAAKLALEVAEQALLKAPPAARKSKPRAAQ
LKLAGIATVQNDQPADPKLANK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacagttattgcagacccggctgggccacacgttcaaggatgccggcttgctt
cagcaggccctgacgcatcgcagccacagcagtctgcataacgaacgcctggaattcctg
ggcgactcgatcctgaactgcgtggtcgcgtcgatcctgtacgagcgttaccttgccatc
gacgagggcgacctgtcgcgcctgcgtgccaacctcgtcaagcagcagtcgctgtacgaa
atcgcccagaagctggacctgtcgcaattcctgcgcctgggcgagggcgagctgaagtcg
ggcggcttccgccggccgtcgatcctggcggacaccctcgaagcgctgctgggcgcgatc
ttcctggacgccggcttcgacgccgccgccaccgtgatccgtgccttctacatcccgatc
ctggactccgtcgacccgcgcaccttgggcaaggatgccaagaccctgctgcaggagttc
ctgcagagtaagaaaatttccctgccgctgtacaatgtggtagccacgcacggcgccgcg
cacagccaggaattcgagatcgaatgcctggtgcccaagctgggcatccaggtgtatggc
cgcggcggcagccgccgtgccggcgagcaggccgcggccaagctggcgctggaggtggcc
gagcaggcgctgctgaaggcgccgccggcggcccgcaaatcgaagccgcgcgccgcccag
ctgaagctggcgggcatcgccacggtccagaacgaccagccggcggaccccaagctcgcc
aacaaataa
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