Empedobacter haloabium: E7V67_017895
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Entry
E7V67_017895 CDS
T09755
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00300
Lysine biosynthesis
ehb01100
Metabolic pathways
ehb01120
Microbial metabolism in diverse environments
ehb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E7V67_017895 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ehb01002
]
E7V67_017895 (dapE)
Enzymes [BR:
ehb01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
E7V67_017895 (dapE)
Peptidases and inhibitors [BR:
ehb01002
]
Metallo peptidases
Family M20
E7V67_017895 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WUR11565
LinkDB
All DBs
Position
4105646..4106782
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AA seq
378 aa
AA seq
DB search
MTDSRTLALTEKLLQRSSVTPEDKGCQQQLIHALEPLGFQCETIVSGDVTNLWARRGTEQ
PVLVFAGHTDVVPTGPVEQWASEPFFPTIRDGKLYGRGAADMKTSIAAFVVACEEFVAAH
PDHKGSIAFLITSDEEGPATDGTVVVCNKLKERGEQLDYCIVGEPTSDKTLGDIIKNGRR
GSLSGCLTIKGVQGHIAYPQLAKNPIHLAAPALADLVAEVWDEGNEYYLPTSWQMSNVKA
GTGANNVIPGEMVIDFNFRFSTASTADSLKQRVHAILDRHGLTYDLKWTLSGLPFLTPRG
TLSTALCEAIKAETGVETELSTTGGTSDGRFIAQICPQVIEFGPPNASIHKIDEHIEVRF
IDPLKNIYRRTLENLLLG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaccgactcccgtaccctcgcgctgaccgaaaaacttctccagcgttcttccgtcacg
ccggaggacaaaggctgccagcagcagctgatccatgcgctggaaccgctgggcttccaa
tgcgagaccatcgtttccggcgacgtgacgaacctgtgggcccgccgcggcaccgaacag
cccgtgctggtgttcgccggccacaccgacgtggtgccgaccggccctgtcgagcagtgg
gcctcggagcccttcttcccgaccatccgcgacggcaagctgtatggccgcggcgcagcc
gacatgaagacctcgatcgcggcatttgtcgtcgcctgcgaggagttcgtcgccgcccat
cccgaccacaagggctcgatcgccttcctgatcaccagcgacgaggaaggcccggccacc
gacggcaccgtggtcgtctgcaacaagctgaaagaacgcggcgagcagctggactactgc
atcgtcggcgagccgacgtcggacaagactctgggcgacatcatcaagaacggccgccgc
ggctcgctgtccggctgcctgacgatcaagggcgtgcagggccatatcgcctatccacag
ctggcgaagaatccgatccacctggccgcgccggcgctggccgacctggtggccgaggtg
tgggacgaaggcaatgaatactacctgcccacctcctggcagatgtccaacgtgaaggcc
ggcaccggcgccaacaacgtgatcccgggcgagatggtcatcgacttcaacttccgcttc
tccaccgccagcacggccgacagcctgaagcagcgcgtgcacgcgatcctggaccgccac
ggcctgacgtacgacctgaaatggaccttgtccggcctgcccttcctgaccccgcgcggc
acgctgtccacggcgctgtgcgaggcgatcaaggcggagacgggcgtggagacggagctg
tcgaccacgggcggtacctcggacgggcgctttatcgcgcagatctgcccccaggtgata
gaattcggcccgcccaacgccagcatccacaagatcgacgagcacatcgaagtgcgcttc
atcgatccgctgaagaacatctaccgccgcacgctggaaaacctgctgctcggctga
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