Empedobacter haloabium: E7V67_019160
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Entry
E7V67_019160 CDS
T09755
Name
(GenBank) DUF4214 domain-containing protein
Organism
ehb
Empedobacter haloabium
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4214
Big_13
Big_12
HemolysinCabind
Big_9
Expansin_C
Cadherin_3
Cadherin_5
Big_5
bMG3
CheC
GEVED
Rbx_binding
TcfC
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
WUR11807
LinkDB
All DBs
Position
complement(4382960..4388203)
Genome browser
AA seq
1747 aa
AA seq
DB search
MSSTFDFSSRVISAPDPDSTPSSTVYQTVDGHTLQLTGDRGGWAVMQEGVYAGGDVAVLH
GAALFKGISDFASSLRLSLEPGTVFDLTSLNLWDQNARAGVQFRLTTSTGHSMDTAPTDA
QGAVSFLDRGTLLQGVSWVEISMTDARETFSPALDDIVLSNISFVPRFSAFDFTLAARQN
GAAVDLASLLRVTDSDSGQTLTWTQVSGPAHGTLILSNATATIRDGDGDIEPGGTLTYQS
AAGYAGMDSFTIRVSDGIASKMQTVTVKVAPDRPGAPQLDPADDTGAPGDNVTAADAMTF
SGTSGAGDSSSSVRVFVDTDGDGAFDAGEANGTATVADGSWRVEHLDTSRLASGTYDVRA
IVTSASGNVSSAASESLSIRIDHTPPALTAGAIALSADSGSSASDGITNRAAQTITAQLS
APLAAGDKLLGSVDGGRSWTDLTDKVAGTTLTWTGATLVDGGGIALRVDDETGNQGVTAI
RAYTLDTLAPSQGMASIALAADTGASATDLVTNVAAQIISGTLSASTGAGDIVEVSLDDG
AHWSQAQNTSGSSAWTLAGQTLPASGTLQVRVSDTAGNHGPATALAYVVDTGAPSAALPV
GAELVAPTGAMFAFTVTYGDAATGIDAATFGTGNVTVRDPQGNLLAVTGFAVSGNVATYT
VQAPGGSWDTGDAGAYAIGIGAQRVRDVAGNPVDAATATLDVTFSTAPKVSALALGADTG
ISATDFVTKERTQTIEATLRHALAAGDKVWGSLDNGATWTDITGSVDGTAVRWQGVTLAD
AGTIVVKATDNAGQDSQGASHAFQLIATAPTVAAADIAFAADSGASANDFVTRTATQNMG
GTLDGVLAAGQFVEVSLDGGAHWVNATGGASTWTLHDQTLAGSGTVQVRIGDVAGNHGAV
LEQRYTIDAEAPLAARPVRADVLDPRGAFTFAVAYADAGGAGLDPATFGTGNVTVRGAHG
ALAVSGYSVAGGTVTYTVDAPAGGWTAASLGDYTIGITGTVRDLAGNAVAADANALTFHV
GVRPTATITVADSALAAGETTTVTIAFDQAGVRGLDLADLTVARGTLSGLTSAGDGRTWT
ATLTPAAGTWADGNTVTLDLGGVMSADGTIVAGSVRSNAYAVQTGTPPQTATNATMDGMP
VLALTGTDPATGLAVRTITVQPVPAGRAAGDLADIVLDAAAGSQKASLSVGLPVGAALQL
GGPTALLTHEQALLDLAHRLGTPAADAGKAFLAGLGAGLPVQTATLVPIASSAALPLTIG
ATGNAASAIVLDARQLAAGATVMLDNVDFAAVVGQVTLRGGAGDNYVVGDDARQNLYLGA
GDDVLLGGGGDDVIGSAGGNDTLDGGSGNDVVIGGVGDDRLAGGSGDDVLQGGRSERGAW
TFTLDGKGSLTARHETATFAPGQQESVALAELNKAAAGLDFLQASATTLVDIALLYRAAF
GRAPDLAGLNFHLERGGDMAAIARGFTASAEWRELGLERLDNAAFVRQMYEQVLGRKGDP
EGLAFWAAQLEGATGKFVTRAEVLAGFALSDEARALHKGGLAIAATSVTLEDGWLTGSGN
DRLAGGAGNDTLVGGDGMDTAVFEGKRADARVTLGADGLVHVVTATGTDTLRSIELGEFA
DGTVDLRFTQASVDKLATVGLLYQAVLDRAGDAAGFAFWAAQDVPVARLAVGFAGSTEFQ
ARYGDMDDAGFVRALYANSGLATNAAGGSAAWVDYLQTHSRAELVGAWVGQDAVHDAQFA
TGGLWLV
NT seq
5244 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaccttcgatttctccagccgcgtcatcagcgccccagaccccgacagcacg
ccgtcgtccacggtgtaccagaccgtcgacggccacacgctgcagctgacgggcgaccgt
ggcggctgggcggtgatgcaggagggcgtctacgcgggcggcgacgtcgcggtactgcac
ggcgccgcgttgttcaagggaatcagcgactttgccagttcgctgcgcctgtcgctcgag
cccggcacggtgttcgacctgacctccctcaacctgtgggaccagaatgccagggcgggc
gtccagttccggctgacgaccagcacgggacacagcatggacaccgcgccgaccgatgcg
cagggcgccgtgtcgttccttgaccgcggcaccttgctgcaaggcgtgagctgggtcgag
atctcgatgacggacgcgcgcgaaacgttcagcccggccctggacgacatcgtgctgtcc
aatatctccttcgtgccccgcttcagtgccttcgacttcacgctggctgcccggcagaac
ggtgccgccgtcgatctcgccagcctgctgcgcgtcacggacagcgacagcggccagacg
ctgacgtggacacaggtcagcgggcccgcccacggcacgctgatcctgtcgaatgcgacg
gccacgatccgcgacggcgacggcgacatcgaaccgggcggcaccctgacctaccagagc
gccgccggttacgcgggcatggacagcttcacgatccgcgtgtcggacggcatcgccagc
aagatgcagaccgtcaccgtcaaggtggcgccggaccggccaggcgcgccgcagctggac
ccggccgacgacaccggcgcgcccggcgacaacgtcacggcggccgacgccatgacgttc
tccggcaccagcggcgcgggcgacagcagcagcagcgtgcgcgtgttcgtcgatacggac
ggcgacggcgccttcgatgccggcgaagccaacggcacggccactgtcgccgacggcagc
tggcgggtggaacacctcgacacctcgcgcctggccagcggaacctacgacgtgcgcgcc
atcgtcacctcggccagcggcaatgtgtcgagcgcggccagcgagtcgctgtcgatccgc
atcgaccataccccaccggcgctcacggccggcgccatcgcgctgtcggccgacagcggc
agcagcgccagcgacggcatcaccaaccgcgcggcgcagaccatcacggcgcagctgtcg
gcgcccctggcggccggcgacaagctgctgggctccgtcgacggcggtcgcagctggacc
gacctgacggacaaggtcgccggcacgacgctgacctggaccggcgcgacgctggtcgac
ggcggcggtatcgcgctgcgcgtggacgacgagaccggcaaccagggcgtgaccgccatc
cgcgcctacacgctcgacacgctggcgccgagccagggcatggcgagcatcgcgctggcc
gccgacaccggcgccagcgccaccgatctcgtcacgaacgtggcggcgcagatcatctcc
ggcacgctcagcgcgagcacgggcgccggcgacatcgtcgaggtctcgctcgacgacggc
gcgcactggagccaggcccagaacaccagtggcagcagcgcatggacattggcggggcag
acgctgcccgccagcggcacgctgcaggtgcgcgtcagcgataccgccggcaaccacggt
cccgccaccgcgctggcctacgtggtcgacaccggcgcgcccagcgccgcgctgcccgtt
ggcgcggagctggtggcaccgaccggcgccatgttcgccttcaccgtcacgtacggcgat
gccgccaccggcatcgacgcggccacgttcggcaccggcaacgtgaccgtgcgcgacccg
cagggcaacctgctggccgttaccggcttcgccgtcagcggcaacgtcgccacctacacg
gtgcaggcgccgggcggcagctgggataccggcgatgcgggcgcctacgcgatcggcatc
ggcgcgcagcgcgtgcgcgacgtggcgggcaaccccgtcgatgccgccacggctaccctc
gacgttaccttcagcacggcccccaaggtgagcgcgctggcgctgggtgccgacactggc
atcagcgcgaccgatttcgtcacgaaggagcgcacgcagaccatcgaggccacgttgcgc
catgcgctggccgccggcgacaaggtgtggggctcgctggacaacggcgccacgtggacc
gacatcacgggatcggtggacggcaccgccgtgcgctggcagggcgtcacgctggccgat
gccggcaccatcgtcgtcaaggccaccgacaacgccggccaggacagccagggcgcgagc
cacgcgttccagctgatcgccacggcaccgaccgtggccgccgcggacatcgccttcgcg
gccgacagtggcgccagcgccaacgacttcgtcacgcgcacggccacccagaacatgggc
ggcacgctggacggcgtgctggcggccggccagttcgtcgaggtgtcgctggacggcggt
gcgcactgggtcaacgccacgggcggcgccagtacctggacgctgcacgaccagaccctg
gccggcagcggcaccgtgcaggtgcgcatcggcgatgtcgccggtaaccatggcgccgtg
ctggaacagcgctataccatcgatgccgaagcgccgctggccgcgcgtcccgtgcgcgcc
gatgtgctcgatccgcgcggcgccttcacgttcgccgtcgcctacgccgatgcgggcggt
gcgggtctcgatccagcgacgttcggcaccggcaacgtgacggtgcgcggcgcgcacggc
gcgctggcggtctcgggctactcggtggccggtggcacggtgacctatacggtggacgcg
cccgccggcggctggaccgcggcgagcctgggcgactacaccatcggcattaccggcacc
gtgcgcgacctggccggcaacgccgtcgcggccgacgccaatgcgctgacgttccacgtc
ggcgtgcgcccgaccgccacgatcacggtggccgacagcgcgctggcggccggcgagacg
accacggtgacgatcgcttttgaccaggcgggcgtgcgcggcctggacctggccgacctc
acggtggcgcgcggcacgctgtccgggctgaccagtgcgggcgacggccgcacctggacc
gccaccttgacgccggccgccggcacctgggcggacgggaacacggtcacgctggacctg
ggcggcgtgatgagcgccgacggcacgatcgtcgcgggcagcgtgcgctcgaacgcctat
gccgtgcagaccggcacgccgccgcagaccgcgacgaatgcgacgatggacggcatgccg
gtgctggcgctgaccggcaccgatcccgccacgggcctggcggtacgcacgatcaccgtg
cagccggtgccggcgggccgcgcggccggcgacctggccgatatcgtgctggacgcggcg
gcgggcagccagaaagccagcttgagtgtcggcctgccggtcggcgcggccctgcaactg
ggcggccccacggcgctgctcacgcacgagcaggcgctgctcgacctggcgcatcggctc
ggcacgccggcggccgatgccggcaaggccttcctggccgggctgggggccggactgccg
gtgcagacggccacgctggttccgatcgcttcctccgccgcgctgccgctgacgatcggg
gccactggcaacgccgccagcgccatcgtgctggacgcgcgccagctggcggccggcgcc
accgtcatgctcgacaacgtggacttcgccgccgtcgtcggccaggtcaccctgcgcggc
ggcgccggcgacaactacgtggtcggtgacgatgcccgccagaacctgtacctcggcgcg
ggcgacgacgtgctgctgggcggcggcggcgacgacgtcatcggcagcgccggcggtaac
gatacgctcgatggcggtagcggcaacgatgtcgtcatcggcggcgttggcgacgaccgc
ctggcagggggcagcggcgacgacgtgctgcagggcgggcgcagcgagcgcggtgcctgg
accttcacgctcgatggcaagggcagcctgacggcgcgccacgagacggccacgttcgcc
cccggccagcaggagagcgtggcgttggcggagctgaacaaggccgccgcgggactggac
ttcctgcaggcctccgccacgacgctggtcgatatcgcgctgctgtatcgggccgcgttc
ggccgcgcccccgacctggcgggcctgaacttccacctggagcggggcggcgacatggcg
gcgatcgcgcgcggctttaccgcgtcggccgagtggcgcgagttggggctggagcggctg
gacaacgcggcgttcgtgcgccagatgtacgagcaggtattgggccgcaagggcgacccc
gagggcctggccttctgggccgcgcagctggagggcgccactggcaagttcgtgacgcgc
gccgaagtgctggccggcttcgcgctcagcgacgaggcgcgggcgctgcacaagggcggt
ctggcgatcgccgcgaccagcgtcacgctggaagacggctggctcaccggcagcggcaac
gaccgcctggccggtggtgccggcaacgatacgctggtcggcggcgatggcatggacacg
gcggtgttcgaaggcaagcgggccgacgccagggtcacgctgggcgccgacggactggtc
cacgtcgtcaccgccaccggtacggacacgctgcgctccatcgagctgggcgagttcgcg
gacggcaccgtcgacttgcgcttcacccaggccagcgtcgacaagctggcgaccgtcggc
ctgctgtaccaagccgtgctcgaccgcgccggcgacgcggccggcttcgccttctgggcg
gcgcaggacgtgccggtggcccggctggcggtgggtttcgccggctcgaccgagttccag
gctcgctatggcgacatggacgacgctggctttgtgcgtgccttgtacgccaattccggc
ctcgcgaccaacgcggctggcggcagcgcggcgtgggtcgactacctgcagacgcacagc
cgtgccgagctggtaggcgcttgggtagggcaagacgccgtgcacgatgcgcagtttgca
acaggcggtctgtggctggtatga
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