Empedobacter haloabium: E7V67_019610
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Entry
E7V67_019610 CDS
T09755
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ehb
Empedobacter haloabium
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehb03016
]
E7V67_019610 (truA)
Enzymes [BR:
ehb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
E7V67_019610 (truA)
Transfer RNA biogenesis [BR:
ehb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E7V67_019610 (truA)
Prokaryotic type
E7V67_019610 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WUR11891
LinkDB
All DBs
Position
complement(4485256..4486080)
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AA seq
274 aa
AA seq
DB search
MKRIALGVQYNGADWQGYQVQPHGCTVQDKLEQAIEKFACVRIGTTCAGRTDAGVHALGQ
VVHFDTDLQREPHAWVRGINAFLPDSIGVRWAKELHEVVAYGEAEFDPAADFHARFSARS
RTYHYLLYNHAVRAPLLAGRAGFTHRPLDVARMRAAVAPLIGTHDFSAFRASGCQAKTPV
KDMQEITIERHGDMILFTLRASAFLHHMVRNLVGALIYVGQGREDTTWLGELLAGRDRTL
AAPTFMPDGLYLANIEYDAKWGLPQETPRILPAF
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgcatcgcattgggagtccagtacaacggcgccgactggcagggctatcaggtg
cagccgcacggctgcacggtgcaggacaagctggagcaggcgatcgagaagttcgcctgc
gtgcgtatcggcaccacgtgcgccggccgcaccgatgcgggcgtgcacgcgctggggcag
gtggtccatttcgacacggacctgcagcgcgagccgcacgcctgggtgcgaggcatcaac
gccttcctgcccgattcgatcggcgtgcgctgggccaaggagctgcatgaggtcgtcgcg
tatggcgaggccgagttcgacccggcggccgacttccacgcgcgcttctcggcgcgctcg
cgcacttatcactacctgctgtacaaccacgccgtgcgtgcgccgctgctggccgggcgc
gccggtttcacgcaccggccgctggacgtggcgcgcatgcgcgcggctgtcgcgccactg
atcggcacgcacgacttctcggccttccgtgcctccggctgccaggcgaaaacacctgtc
aaggacatgcaggagatcaccatcgagcgccacggcgacatgatcctgttcaccttgcgc
gccagcgccttcctgcaccacatggtgcgcaacctggtcggcgcgctgatctacgtgggc
cagggccgcgaggacacgacctggctgggcgaactgctggcggggcgcgaccgcacgctg
gcggcgcccacgttcatgcccgatggcctgtacctggccaatatcgaatacgatgccaag
tggggcctgccgcaggagaccccacgcatcctgcccgctttctga
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