Empedobacter haloabium: E7V67_022015
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Entry
E7V67_022015 CDS
T09755
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb03030
DNA replication
ehb03430
Mismatch repair
ehb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E7V67_022015 (dnaE)
03430 Mismatch repair
E7V67_022015 (dnaE)
03440 Homologous recombination
E7V67_022015 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehb03032
]
E7V67_022015 (dnaE)
03400 DNA repair and recombination proteins [BR:
ehb03400
]
E7V67_022015 (dnaE)
Enzymes [BR:
ehb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E7V67_022015 (dnaE)
DNA replication proteins [BR:
ehb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E7V67_022015 (dnaE)
DNA repair and recombination proteins [BR:
ehb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E7V67_022015 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
WUR12352
UniProt:
A0ABZ1UIL3
LinkDB
All DBs
Position
complement(5062488..5066036)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSTEILDQPVIQPDEPAAPAGPGFVHLRVHSEYSIVDGLVRIDDLVKAAARDRQAALAVT
DLSNLFGMVKFYKSARGKGIKPIIGCDVWITNDDNRDKPARLLLLAKNRVGYLQLCELLS
LAWLTNQHKGRAELRTEWLAELKDKTYDIYPGESGANGLIALSGAQFGDIGCAIDNGNLE
LAERNAQKWSAIFPGHFYVEIQRAGQPNQEAQVRHSVALAAKLRLPVVATHPVQFMSEHE
FIAHEARICIAEGEMIANAKRVKRFNEQMRFMTQEEMEILFADLPAALANSVEIARRCNV
TLTLGKPQLPNFPTPGMTIDEFLVAETQKGLEERLLQLFPDPHKREEMRPRYEERLKFEN
DTIIKMKFPGYFLIVAEFIQWGKNNGVPIGPGRGSGAGSLVAYALKITDLDPLKYNLLFE
RFLNPERVSMPDFDIDFCQEKRELVIQHVKDLYGRDAVSQIATFGTMAAKGAIRDVGRVL
DFGYNFCDGISKLIPFKPGKPVTIAEAIEEEPLLKERLENEEEVKQLLDLAQQVEGITRG
IGMHAGGVLIAPGKLTDFCPLYTQSGDSGVVSQYDKDDVEAVGLVKFDFLGLTTLTILDR
AVNYIRELDPAHKDFDLANVPLDDRGSYDLLTKAKTVAVFQLESRGMQGMLKDARPDRFE
DIIALVALYRPGPMDLIPDFCKRKHGEKFDYPDPRTEGILSETYGIMVYQEQVMQMAQII
GGYSLGGADMLRRAMGKKKAEEMAEHREIFRKGAGERGLTTEKADEIFDLMEKFAGYGFN
KSHAAAYALLSYHTAYLKQHHTAAFMAANMSLAMDDTEKVKILVEDSIEVCGLTILPPDI
NLSAYRFRPDGPPPSVTGKKVTNIRYGLGGVKGAGQNAIEAIIAAREADGPFTSLFDFCR
RVDKKQINRRTIEALIRSGAFDCFGVDRAVLFASVGFAMECADQEARAANQVSLFGGDDS
DLVAPPEYVQAMPWTDRQKLAEEKMALGYYLSGHMFDSYAQEARRFARTKLSELEPSREP
RMLCGVITGIRTQMTQRGKILIVTLDDKSAVVEVTVYSEIFEANKKAFKEDEFLAVTGKV
SEDRFTGGLRISAEKVYDIVSARLQFGRQMGWMLPEPVPAAKLRDVLAPHRDDYGLPIQM
RIKPQGIDCVLQLGDDWRVAPSDALTVALEQVLGAREIAVEY
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgaaatcctagatcagcccgtcatccagcccgacgaacccgcggcccccgcc
ggacccggcttcgtccacctgcgggtgcactccgaatactcgatcgtggacggcctggtg
cgcatcgacgacctggtcaaggcggccgcccgcgacaggcaggcggccctggccgtcacc
gacctgtccaacctgttcggcatggtcaagttctacaagtcggcgcgcggcaagggcatc
aagccgatcatcggttgcgacgtctggatcaccaacgacgacaaccgcgacaagccagcg
cgcctgctgctgctggcgaagaaccgggtcggctacctgcagctgtgcgaactgctgtcg
ctggcctggctgaccaaccagcacaagggccgcgccgagttgcgcaccgaatggctggcg
gagctgaaggacaagacctatgacatctaccccggcgaaagcggtgccaacggcctgatc
gcgctgtccggcgcgcagttcggcgacatcggctgcgccatcgacaacggcaacctggaa
ctggccgagcgcaacgcgcagaagtggtcggcgatcttcccgggccacttctacgtcgaa
atccagcgcgccggccagccgaaccaggaggcgcaggtgcgccattcggtggcgctggcg
gccaagctgcgcctgcccgtggtggcgacgcatccggtgcagttcatgtcggagcacgag
ttcatcgcgcacgaggcgcgcatctgtatcgccgagggcgagatgatcgccaacgccaag
cgcgtcaagcgcttcaacgagcagatgcgcttcatgacgcaggaagagatggagatcctg
ttcgccgacctgccggccgcgctggcgaactccgtcgaaatcgccaggcgctgcaacgtc
acgctcacgctgggcaagccgcagctgccgaacttccccacgcctggcatgacgatcgac
gagttcctcgtcgccgaaacgcaaaaaggcctggaagagcgcctgctgcagctgttcccc
gatccgcacaagcgcgaggagatgcggccgcgctacgaggagcgcctgaagttcgagaac
gacaccatcatcaagatgaagttcccgggctacttcctgatcgttgcggagttcatccag
tggggcaagaacaatggcgtgccgatcggccccggccggggttccggcgccggctcgctg
gtcgcgtacgcgctgaagatcacggacctggacccgctgaaatacaacctgctgttcgag
cgtttcctgaacccggaacgggtctcgatgcccgacttcgacatcgacttctgccaggaa
aagcgcgaactggtgatccagcacgtgaaggacctgtacgggcgcgacgccgtgtcgcag
atcgccacgttcggtaccatggcggccaagggcgcgatccgcgacgtgggccgcgtgctg
gacttcggctacaacttctgcgacggcatctcgaaactgattcctttcaaaccgggcaag
ccggtgacgatcgccgaggcgatcgaggaagagccgctcttgaaggagcgcctggagaac
gaggaggaggtcaagcagctgctcgatctcgcccagcaggtcgagggcatcacgcgcggc
atcggcatgcacgccggcggcgtgctgatcgcgcccggcaagctgaccgacttctgcccg
ctgtacacgcagtccggcgattcgggcgtggtgtcgcagtacgacaaggacgacgtggaa
gccgtcggcctggtcaagttcgacttcctgggcctgaccacgctgacgatcctggaccgc
gcggtgaactacatccgcgagctcgatccggcccacaaggacttcgacctggccaacgtg
ccgctggacgaccgcggctcgtacgacctgctgaccaaggccaagaccgtggccgtgttc
cagctggagtcgcgcggcatgcagggcatgctgaaggacgcccggcccgaccgcttcgaa
gacatcatcgcgctggtcgcgttgtaccgtcccggcccgatggacctgatccccgacttc
tgcaagcgcaagcacggcgagaagttcgactaccccgatccgcgcacggaaggcatcctg
tccgagacctacggcatcatggtctaccaggagcaggtcatgcagatggcgcagatcatc
ggcggctactcgctgggcggcgccgacatgctgcgccgcgcgatgggcaagaagaaggcc
gaggagatggccgagcaccgcgagatcttccgcaagggcgcgggcgaacgcgggctgacg
acggaaaaggccgacgagatcttcgacctgatggagaagttcgcgggctacggcttcaac
aagtcgcacgccgccgcgtacgcgctgctgtcgtaccacaccgcctacctgaagcagcac
catacggccgcgttcatggcggccaacatgtcgctggcgatggacgacacggaaaaggtc
aagatcctggtcgaggactcgatcgaggtgtgcggcctgacgatcctgccgccggacatc
aacctgtcggcctaccgcttccgtccggacggcccgccgccttccgtcaccggcaagaag
gtcaccaacatccgctacggcctgggcggcgtcaagggcgccggccagaacgccatcgag
gcgatcatcgcggcgcgcgaggccgatgggccgttcaccagcctgttcgacttctgccgc
cgcgtcgacaagaagcagatcaaccgccgcaccatcgaggcgctgatccgctccggcgcg
ttcgactgcttcggcgtggaccgtgccgtgttgtttgcctcggtcggcttcgcgatggaa
tgcgccgaccaggaagcgcgcgccgccaaccaggtcagcctgttcggcggcgacgacagc
gacctggtggcgccgcccgaatacgtgcaggcgatgccgtggacggaccgccagaagctg
gcggaggaaaaaatggcgctgggctactacctgtccggccatatgttcgacagctatgcg
caggaagcgcggcgcttcgcccgcaccaagctgtccgagctggagccctcgcgcgagcca
cgcatgctgtgcggcgtcatcacgggcatccgcacccagatgacgcagcgcggcaagatc
ctgatcgtcaccctggacgacaagagcgccgtggtcgaggtgacggtgtacagcgagatc
ttcgaggccaacaagaaggcgttcaaggaggacgaattcctggcggtgacgggcaaggtg
tcggaggaccgtttcacgggcggcctgcgcatctcggccgagaaggtgtatgacatcgtg
tccgcgcgcctgcagttcggccgccagatgggctggatgctgccggagccggtgccggcc
gccaagctgcgtgacgtgctggcgccgcaccgcgacgactacggcctgccgatccagatg
cgcatcaagccgcagggcatcgactgcgtgctgcagctgggcgacgactggcgcgtggcc
ccgtcggacgcgctgacggtggcgctggagcaggtactgggcgcgcgcgagatcgctgtc
gaatactga
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integrated database retrieval system
