Empedobacter haloabium: E7V67_022415
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Entry
E7V67_022415 CDS
T09755
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
ehb
Empedobacter haloabium
Pathway
ehb02020
Two-component system
ehb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E7V67_022415
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E7V67_022415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehb03021
]
E7V67_022415
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ehb02035
]
E7V67_022415
Transcription machinery [BR:
ehb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E7V67_022415
Bacterial motility proteins [BR:
ehb02035
]
Flagellar system
Flagellar assembly proteins
Stator
E7V67_022415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_28
UPF0122
DUF3562
KORA
HTH_5
Motif
Other DBs
NCBI-ProteinID:
WUR12429
UniProt:
A0ABZ1UID6
LinkDB
All DBs
Position
complement(5187972..5188733)
Genome browser
AA seq
253 aa
AA seq
DB search
MNASAYAMVAEPVSADEAPSLWTAFVSGREEGLRQRLIGRYMEFARMLAARMYARRTFLE
LEFDDFLQYARLGLMEAVDRYDPGQGARFETFAALRINGAILSGIGSYSEVQEQVAARRR
VLAERIDGILQPAPRRDDPAALFAHLADLAIGLAVGFALEGTGMVRDGDEPSIEQAYDGI
ELRQLRARLREMLAGLGERQRKVLSWHYLEQRGFDEIAAHLGVSRSRVSQLHTDGLATLR
RQWRLRDVVDWSF
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccagtgcctacgccatggtagccgagccggtgagcgcggacgaggcgccatcc
ctgtggacggcgttcgtcagcggccgcgaggaaggcttgcgccagcgcctgatcgggcgc
tacatggagttcgcccgcatgctggccgcgcgcatgtacgcccggcgcacgttcctggaa
ctggagttcgacgatttcctgcagtatgcgcggctgggattgatggaagcggtggaccgc
tacgatccgggccagggcgcccgcttcgagacctttgccgcgctgcgcatcaatggcgcg
atcctgtccggcatcggctcgtattcggaagtgcaggagcaggtggcggcgcgccgccgc
gtgctggccgagcggatcgacggcatcctgcagccggcgccgcggcgggacgacccggcc
gcgctgttcgcgcacctggccgacctggcgatcggcctggcggtgggctttgcgctggag
ggcaccggcatggtgcgcgatggcgacgagccgagcatcgagcaggcctacgacggcatc
gagctgcgccagctgcgcgcccggctgcgcgagatgctggccgggctgggcgagcgccag
cgcaaggtgctgagctggcactacctggagcagcgcggcttcgacgagatcgccgctcac
ctgggcgtcagcaggagccgcgtctcgcagctgcataccgatggcctggcgacgctgcgc
cggcagtggcgcctgcgcgatgtggtggactggagtttttag
DBGET
integrated database retrieval system
