Empedobacter haloabium: E7V67_024930
Help
Entry
E7V67_024930 CDS
T09755
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00300
Lysine biosynthesis
ehb00470
D-Amino acid metabolism
ehb01100
Metabolic pathways
ehb01110
Biosynthesis of secondary metabolites
ehb01120
Microbial metabolism in diverse environments
ehb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E7V67_024930 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E7V67_024930 (dapF)
Enzymes [BR:
ehb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
E7V67_024930 (dapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
WUR12896
UniProt:
A0ABZ1UJJ1
LinkDB
All DBs
Position
5739870..5740733
Genome browser
AA seq
287 aa
AA seq
DB search
MKLKFTKMHGAGNDFVVIDAINQQIDFSPAQWQALADRRFGVGADQMLVVEKSAQPGCDF
RYRIFNSDGGEVEQCGNGARAFVKFVAEKGLTDRRSICVETMAGVISPRLEEDGSVTVDM
GAPVLEPALVPFDTEGLQGQPQGQDTLWPLVLELAGEKETVLVSVLSMGNPHAVQVVTDV
DTAPVELTGPLIELHPHFPKRVNAGFMQVLDRQHIRLRVFERGAGETLACGTGACAAAVA
GIRRGLLDSPVRVDARGGQLSIAWAGEGQPVYLTGPAVTVFEGEIEL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcaaattcaccaagatgcatggcgcgggcaacgacttcgtggtcatcgacgcc
atcaaccagcagatcgacttctcgcccgcccagtggcaagccctggccgaccgccgtttc
ggtgtcggcgccgaccagatgctggtcgtggaaaaatccgcgcagcccggctgcgatttc
cgctatcgcattttcaacagcgatggcggcgaagtggaacaatgcggcaacggcgcccgc
gcttttgtgaaattcgtggccgagaaaggcctgacggaccggcgcagcatctgcgtcgaa
acgatggctggcgttatttcgccgcgcctggaagaagacggcagcgtcaccgtggacatg
ggcgcgcctgtgctggagccggccctggtgccgttcgacacggaaggcctgcaaggtcag
ccgcagggccaggacacgttgtggccgctggtgctggaactggccggcgaaaaggaaacc
gtgctggtgtcggtgctgtcgatgggtaatcctcatgcggtgcaggtcgtgaccgatgtg
gacaccgcgcctgtcgagctgaccgggccgctgatcgagctgcatccgcatttcccgaaa
cgcgtcaatgccggtttcatgcaggtgctcgaccgccagcatatccgcctgcgcgtattc
gaacgcggtgccggcgagacgctggcctgcggcacgggcgcctgcgcggccgccgtggcc
ggcatccgccgtggcctgctggattcaccggtgcgcgtggatgcgcgcggcggccaactg
tcgatcgcctgggccggcgaaggccagcccgtctacctgacgggcccggccgtgacggtg
ttcgagggcgaaatcgagctgtaa
DBGET
integrated database retrieval system