Empedobacter haloabium: E7V67_027705
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Entry
E7V67_027705 CDS
T09755
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00061
Fatty acid biosynthesis
ehb00071
Fatty acid degradation
ehb01100
Metabolic pathways
ehb01212
Fatty acid metabolism
ehb02024
Quorum sensing
ehb04146
Peroxisome
Module
ehb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
E7V67_027705
00071 Fatty acid degradation
E7V67_027705
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
E7V67_027705
09145 Cellular community - prokaryotes
02024 Quorum sensing
E7V67_027705
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ehb01004
]
E7V67_027705
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ehb04147
]
E7V67_027705
Enzymes [BR:
ehb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
E7V67_027705
Lipid biosynthesis proteins [BR:
ehb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
E7V67_027705
Exosome [BR:
ehb04147
]
Exosomal proteins
Exosomal proteins of breast milk
E7V67_027705
Exosomal proteins of breast cancer cells
E7V67_027705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
WHEP-TRS
Motif
Other DBs
NCBI-ProteinID:
WUR13424
LinkDB
All DBs
Position
complement(6339113..6341053)
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AA seq
646 aa
AA seq
DB search
MQATTFPRRLLEHGRERPHQSAYREKHLGIWQTWTWQQVNDEVRALACGLAALGFGRGMH
LAIVGDNRPRLYWAMLAAQCLGGVAVPLYQDAPAADMAYVLADAGIRFAVVEDQEQVDKL
LELKAQYPAIAHIAYDDERGLRHYRQPELLSFARLQEAGRTWDRANPGCYDAAIEAGQPG
DNAVILYTSGTTGKPKGVCQTHAALLAAGTGGVAFEGLTDQENVLSYLPMAWVGDCLFSF
AQALVAGFTVNCPESGETVMTDLREIGPTYYFAPPRVFENMLTQVMIRMEDAGALKRRLF
HHFMAVARRCGAELLDGRPVPWSDRVAYALGQVLVYGPLKNVLGFSRVKVAYTAGAAIGP
DLFRFYRSIGVNLKQFYGSTETCAYICLQPDGQIKFDSVGKPAPGVDVRLADNGEVLVKS
PTLMDGYYQRPEATAEAIDAEGYFHTGDAGVFDNDGHLRIIDRAADVGRMNHGAIFAPNY
VENKLKFFPFIKEAVAFGHGRDTVCAFLNIDMEAVGNWAERRGIAYAGYTDLAAHPQTYA
LMQECVEKVNADLASEALMGQTQVHRFLVLHKELDPDDDELTRTRKVRRKFIAEKYAVLI
DALYAGKASQYISTQVKFEDGRSGTVSADLRIADCRTFPVVTAHAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcaacgacgttcccgcgccgcctgctggagcacgggcgcgagcggccacaccag
agcgcctaccgcgaaaaacatctgggcatctggcagacgtggacgtggcagcaggtcaac
gacgaggtgcgcgccctcgcctgcggcctggccgcgctgggcttcgggcgcggcatgcac
ctggccatcgtcggcgacaaccggccgcgcctgtactgggccatgctggccgcgcaatgc
ctgggcggcgtggccgtgcccttgtaccaggacgcgcccgccgccgacatggcctacgtg
ctggcggacgccggcatccgcttcgccgtcgtcgaggaccaggaacaggtcgacaagctg
ctggaactgaaggcgcagtatccggcgattgcccacatcgcctacgacgacgaacggggt
ctacgccactaccgccagcccgagctgctgtcgttcgcgcggctgcaggaagcgggccgg
acctgggaccgcgccaaccccggctgttatgacgccgccatcgaggcgggccagccaggc
gacaacgccgtgatcctgtacacctccggcaccaccggcaaaccgaagggcgtgtgccag
acccatgccgcgctgctggcggccggcacgggcggcgtcgcgttcgagggcctgacggat
caggaaaacgtgctctcctacctgccgatggcgtgggtgggcgactgcctgttctcgttt
gcccaggcgctggttgccggcttcaccgtcaactgcccagaatcgggcgagacggtgatg
acggacctgcgcgagatcggcccgacctattatttcgccccgccgcgcgtgttcgagaac
atgctgacgcaggtgatgatccggatggaggacgcgggcgccttgaaacgccgcctgttc
caccacttcatggcggtggcgcggcgctgcggcgccgagctgctggacggccggcccgtg
ccctggtccgatcgcgttgcgtatgccctgggccaggtgctggtgtacggcccactgaaa
aacgtgctcggtttttcgcgcgtgaaggtggcctacacggccggcgccgccatcgggcct
gacctgttccgcttctaccgctcgatcggcgtcaacttgaaacagttttatggctcgacc
gagacttgcgcctacatctgcctgcagccggacggccagatcaagttcgacagcgtgggc
aagccggcgccgggtgtggacgtgcgcctggccgacaacggtgaagtgctggtcaagtcg
cccacgctgatggacggctactaccagcgcccggaagcgacggccgaagcgatcgacgcc
gaaggctacttccataccggcgacgccggcgtgttcgacaacgatggtcacctgcgcatc
atcgaccgcgcggccgacgtggggcgcatgaaccacggcgccatcttcgcgcccaactac
gtcgagaacaagctgaagttcttccccttcatcaaggaggccgtcgcgttcggccatggc
cgcgacaccgtctgcgcgttcctcaacatcgacatggaagcggtgggcaactgggccgag
cggcgcggcattgcctatgcgggctataccgacctggccgcgcatccgcaaacctatgcg
ctgatgcaggaatgcgtcgagaaggtcaacgcggacctggccagcgaagcgctgatgggg
cagacgcaggtgcaccgcttcctcgtgctgcacaaggagctggacccggacgacgacgag
ctgacgcgcacgcgcaaggtgcgccgcaagttcatcgcggagaagtacgcggtgctgatc
gacgcgctgtacgcgggcaaggcctcgcagtacatcagcacccaggtcaaattcgaggac
gggcgcagcggcaccgtctcggccgacctgcgcatcgccgactgccgcaccttcccggtc
gtcaccgcccacgccgcatga
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