Empedobacter haloabium: E7V67_028080
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Entry
E7V67_028080 CDS
T09755
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ehb
Empedobacter haloabium
Pathway
ehb00300
Lysine biosynthesis
ehb00470
D-Amino acid metabolism
ehb01100
Metabolic pathways
ehb01110
Biosynthesis of secondary metabolites
ehb01120
Microbial metabolism in diverse environments
ehb01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ehb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
E7V67_028080
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E7V67_028080
Enzymes [BR:
ehb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
E7V67_028080
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WUR13495
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All DBs
Position
6425495..6426742
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AA seq
415 aa
AA seq
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MNAPAPKLPPQHAPLTQFAVAHDCLLVGGVPLTRLAQRVGQTPFYAYDRAAITARVAELR
RALPADVHLHYAMKANPMPAVVQHLATLVDGIDVASGGELRVALDTPMAPGHISFAGPGK
SDADLACAIAAGIVLNLESEGEMERAAVIGERLGIAPQVNVRVNPDFELKSSGMKMGGGP
KQFGVDAERVPALLRRIGELGLDFHGFHIFSGSQNLKVAALQEAHEKTFALALRLAADAP
RPPRILNIGGGFGIPYFPGEERLDLPVVGANLARILDEVRPQLQCAQVVIELGRYLVGEA
GVYVCRVVDRKESRGHVYLVTDGGLHHHLSASGNFGQVIRKNYPVVIGNRVHGGAREKAS
VVGPLCTPLDLLADQMELARAEPGDLVAVLQSGAYGMTASPAGFLSHPAALEILV
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgcccgcacccaagctgccgccacagcacgcgccgctgacgcagttcgcggtc
gcgcacgactgcctgctggtggggggcgtgccgctgacccgcctggcccagcgcgtgggg
cagacgccgttctacgcctacgaccgcgccgccatcacggcgcgcgtggccgagttgcgc
cgcgcgctgccggccgacgtgcacctgcactatgcgatgaaagccaatccgatgcccgcc
gtcgtgcagcacctggcgaccctggtcgacggcatcgacgtggcctccggcggcgaactg
cgcgtggccctcgatacgccgatggcgcccggccatatcagctttgcgggacccggcaag
agcgacgccgacctggcgtgcgcgatcgcggccggcatcgtgctgaacctggagtcggaa
ggcgagatggaacgcgccgccgtcatcggggaacggctcggcatcgcgccgcaggtcaac
gtgcgcgtcaatccggatttcgaactgaaatcgtccggcatgaagatgggcggcggtccc
aagcagttcggtgtcgatgccgagcgcgtgcccgcgctgctgcgccggatcggcgagctg
gggctggatttccacggctttcacatcttcagcgggtcgcagaatctgaaagtggcggcg
ctgcaggaagcgcacgagaaaacgttcgcgctggcgttgcgcctggcggccgacgcgccc
cgcccgccgcgtatcctgaacatcggcggcggcttcggcattccctacttccccggcgag
gagcggctggacttgcctgtcgtgggcgccaacctcgcccgcatcctggacgaggtgcgt
ccgcaactgcagtgcgcccaggtcgtcatcgaactggggcgctacctggtcggcgaggcc
ggcgtctacgtctgccgcgtggtggaccgcaaggagtcgcgcggccacgtgtacctcgtc
acggatggcgggctgcatcatcacctgtctgcctccggcaatttcggccaggtgattcgc
aagaattatccggtcgtgatcggcaaccgcgtccacggcggcgcgcgcgaaaaggcctcc
gtcgtgggaccgctgtgcaccccgctggacctgctggccgaccagatggaactggcccgg
gccgagccgggcgacctggtcgcggtgctgcagtccggcgcctacggcatgacagccagc
ccggccggcttcctcagccatccggcggcgctggaaatcctggtgtga
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