Candidatus Erwinia haradaeae: ERCIPSTX3056_015
Help
Entry
ERCIPSTX3056_015 CDS
T05981
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd03030
DNA replication
ehd03410
Base excision repair
ehd03420
Nucleotide excision repair
ehd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERCIPSTX3056_015 (polA)
03410 Base excision repair
ERCIPSTX3056_015 (polA)
03420 Nucleotide excision repair
ERCIPSTX3056_015 (polA)
03440 Homologous recombination
ERCIPSTX3056_015 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehd03032
]
ERCIPSTX3056_015 (polA)
03400 DNA repair and recombination proteins [BR:
ehd03400
]
ERCIPSTX3056_015 (polA)
Enzymes [BR:
ehd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERCIPSTX3056_015 (polA)
DNA replication proteins [BR:
ehd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ERCIPSTX3056_015 (polA)
DNA repair and recombination proteins [BR:
ehd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ERCIPSTX3056_015 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERCIPSTX3056_015 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Biopterin_H
Motif
Other DBs
NCBI-ProteinID:
VFP86558
UniProt:
A0A451DIS4
LinkDB
All DBs
Position
1:24562..27354
Genome browser
AA seq
930 aa
AA seq
DB search
MANLLGNSLILVDGFSYLYRAYYACPRLTTSSGFPTGAIYGMLNMLRSLLFQYQPAHIAV
VFDVKGKTFRNEIFTEYKSHRPLMPEDLRIQVEPLHNIIRAMGLPILAIPGVEADDVIGT
LALESEKLGRTVLISTSDKDMAQLVTQKIHLLNTVNNTILGPSEVIKKYGVPPILIIDLL
ALMGDASDNIPGVPGIGHKTAIALLQKLGGIQAIYKNLERISPLAFHRSQNIIKKLEKYK
AIAFLSYKLAMIKTDVPLDITSNQLIQEDPNIDNLLLLFKTFELNKWISDLENQKLWHRN
KRVNLRTEKAIIKKDSVIRSEICSPRVANAYFTILDQVTFSSWLYKLQHSKCFALNLETN
SIDTLTASIIGFSFSAIPGEAAYLPILHDYENAPSQLACLDVLLALKPLLENAQIVKIGK
NLKFDRGVLQRYNIDLKGMCFDTKLESYALNSINNGHDIYTLAQRWLGYDLTLFPDIARE
GKNQMTFNKVSIQAATYYAAIRADIILQLHYKMWKELQKEQGPKNIFEQIEMPLVPVLSR
IEQNGVFIDQRLLSKYSQEIGDRLVKLELKAHRIAGESFNLASPKQLKNILFYKNSLKSL
KKTAHGNLSTSEEVLSKLAIEHPLPQVILEYRSLSKIKSAYTDKLLRMIHPETQRVHTSY
HQAVTVTGRLSSSNPNLQNIPARSNEGRRIRQAFTADHGHCIIAADYSQIELRIMAHFSQ
DIGLLSAFAKEQDIHCATASEMFGIAFSEISKEQRQRAKTINFGLMYGMSPFGLARQLHI
SVKEAKLYVDRYFDRYPGVFQYMQDTRQQALKNGYVSTLYGRRLYLPNIQDKNIMRRKAA
ERAAINAPMQGTAADIIKRTMIHIDQWLLQQKHPSFKIIMQVHDELVFEARTDAVKEASI
KICSIMESSGNLDVPLRVDIGVGKNWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggctaatcttttaggcaattctctcattttggtcgatggcttttcgtatttatatcgt
gcctattatgcttgtccccgtttaactacgtcgtctggttttccgactggtgctatctac
ggtatgttaaatatgctccgtagtttactgtttcaatatcagcctgctcatattgctgtt
gtatttgatgttaagggaaaaacatttcgcaatgagatttttacagaatataaaagtcat
cgcccattaatgccagaggatctacgcatccaagtagaacccttacataacattatcaga
gctatgggtttaccgatattagccatccctggtgttgaagcagatgacgtaataggtacg
ctagcattagaatcagaaaaattaggccgcaccgtgttaattagtacaagtgataaagat
atggctcaattagtaacacaaaagattcacttgctgaataccgtgaataatacaatactt
ggaccatcagaagtgataaagaaatacggtgtcccaccgatattaataattgacttgctg
gccttgatgggtgatgcgtctgataatattccaggagttccaggaattggacataagaca
gctattgcgttactgcaaaaattgggtggcattcaggctatctataaaaatttagaaaga
atatcacctctcgcttttcatcgatctcaaaatatcataaaaaaattagaaaaatacaaa
gctatagccttcctttcctataagctggctatgattaagactgatgtgccacttgacatt
actagtaatcaattgatccaagaagacccaaacatagataatcttctattactatttaaa
actttcgaattaaataaatggatatctgatctagagaatcaaaaattatggcaccggaat
aaaagggtaaaccttcgtacagaaaaagcaattatcaaaaaggatagtgtaatcagatca
gagatatgcagtccacgagttgcaaatgcttattttactattctagatcaagtaactttt
tcgtcctggttgtataaattacaacatagcaaatgttttgcattaaatctggagactaat
tcaatagatacgctcacagccagtattattgggttctctttttcagcgataccaggtgaa
gcagcctatttaccaatattgcatgattatgaaaatgcacctagtcaattggcctgtctc
gatgttctcttagctcttaaaccacttttagagaatgcacaaattgtaaaaattggaaaa
aaccttaaatttgatcgcggggtgttacaaagatataatattgacctaaaaggcatgtgt
tttgatacaaaactggagtcatacgcattaaatagtataaacaatggacatgatatatac
acattagcacaaagatggttaggttatgacttgacattgtttcctgacattgctcgagaa
ggcaaaaatcagatgacctttaataaggtgtctattcaagcagcaacttattatgcagca
atccgtgctgatattatattacagttacattacaaaatgtggaaagaattacagaaagag
caaggtcccaaaaacatatttgaacaaattgaaatgccactcgttcctgtgctatcacgc
atagaacagaatggagtctttattgaccaacgtttgttatcgaagtactctcaagaaatt
ggtgatcgtctggttaagttggaattaaaagcacacaggatagctggagaatcctttaat
ctggcctcaccaaaacaactaaaaaatattttattttataaaaatagcttaaaatcactt
aaaaaaacagctcatggaaatttatccactagtgaagaagtgttatccaagctagcaata
gagcatccattaccacaagtgatcctagaatatcgtagtttatctaaaattaaatcagcc
tacacggataagctgctccgtatgatacacccagagactcaaagagtacatacatcttat
caccaggcagtgacagttactgggcgtctctcttctagtaacccaaacttacaaaacatc
ccagctcggagcaatgaaggccgtcgtatcagacaagcatttactgccgatcatggacac
tgcattatagctgcggattactcacaaattgaattacgcattatggcacatttttcacaa
gatatagggctactatcagcatttgctaaagaacaagacattcactgcgctacagcttca
gaaatgtttggcattgctttttcagaaattagcaaagaacaacggcaacgcgccaaaaca
atcaattttggtttaatgtacggtatgagtccttttggtttagcgcgtcagttacatatt
agcgttaaagaagctaagctatatgtagatcgctattttgatcgatatccgggagtattt
caatacatgcaagacactcgtcaacaagctttaaaaaatggttatgtttcaacactatat
ggtcgccgcttgtatttacctaatattcaagataaaaatattatgcgtcgcaaggccgca
gaacgcgcagctattaacgctcctatgcaaggaacggcagcggatataattaagcgtact
atgattcatattgatcagtggctcttacaacaaaaacatccatcatttaaaattattatg
caggtacatgacgaattagtttttgaagcgcggacagatgctgtcaaagaggcttctata
aaaatttgctccataatggagagcagcggaaatcttgacgtaccattacgtgtagatatt
ggagtaggtaaaaattgggaccaagcacattag
DBGET
integrated database retrieval system
