Candidatus Erwinia haradaeae: ERCIPSTX3056_085
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Entry
ERCIPSTX3056_085 CDS
T05981
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ehd
Candidatus Erwinia haradaeae
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehd03021
]
ERCIPSTX3056_085 (rpoH)
Transcription machinery [BR:
ehd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ERCIPSTX3056_085 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
SWC7
Motif
Other DBs
NCBI-ProteinID:
VFP86644
UniProt:
A0A451DJ38
LinkDB
All DBs
Position
1:135488..136342
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AA seq
284 aa
AA seq
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MTKEIQTLIVSSLGNLDAYIRAVNSWPMLTASEEKELAERLYYRGDLIAAKALILSHLRF
VVHVACNYSGYGLLKADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKKRLGWFNQDEVDMVARELGVSSKDVREMESRMSAQDL
IFDPQPNDDIEHETLAPTCYLQDLSSNFSNGIEEENWGDYASDKLGVALKDLDDRSRHII
QARWLDEKDKTTLQALANYYGVSAERIRQLEKNAMQKLRGAIEV
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagaaatacaaactctcatagtttcttctttaggaaacttagatgcatatatt
cgggcagtaaattcttggccaatgttaacagcaagtgaggaaaaggaattggctgagagg
ttatattaccgtggtgatctaatagcagctaaggcattgattttatcacacttacgtttt
gtagtgcatgtcgcatgtaattattctggttatggattactaaaagcagatttaattcaa
gaaggtaatattggtcttatgaaagcagtgcgccgttttaatccagaagtcggtgtgcgt
ttagtgtcttttgctgtacactggattaaagcagaaattcatgaatatgtgttgcgtaat
tggcgtattgttaaggttgccactacaaaagcgcagcgtaagttattctttaatcttcga
aaaactaaaaaacgtttagggtggtttaatcaagatgaagttgatatggttgctcgagaa
cttggagttagcagtaaggatgttcgtgaaatggaatcgagaatgtctgcgcaagattta
atttttgaccctcaaccaaatgatgatattgaacatgaaacgctagctccaacttgttat
ttacaagacctatcgtctaatttttcgaatggtattgaggaagagaattggggagattat
gcctctgataagcttggtgtagcattaaaagatcttgatgatcgtagtcggcatattatt
caagcaagatggttagacgaaaaagataaaaccacccttcaggcattagcgaattattat
ggtgtgtctgctgaacgtattcgacagttagagaaaaatgctatgcaaaaattgcgtgga
gctattgaagtttaa
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