Candidatus Erwinia haradaeae: ERCIPSTX3056_103
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Entry
ERCIPSTX3056_103 CDS
T05981
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd03420
Nucleotide excision repair
ehd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ERCIPSTX3056_103 (uvrD)
03430 Mismatch repair
ERCIPSTX3056_103 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ehd03400
]
ERCIPSTX3056_103 (uvrD)
Enzymes [BR:
ehd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERCIPSTX3056_103 (uvrD)
DNA repair and recombination proteins [BR:
ehd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ERCIPSTX3056_103 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ERCIPSTX3056_103 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
VFP86665
UniProt:
A0A451DJ21
LinkDB
All DBs
Position
1:166853..169021
Genome browser
AA seq
722 aa
AA seq
DB search
MNASDLLLHLNMQQRVAVSAPRSNFLVLAGAGSGKTRVLSYRIAWLIEIEKCSPQSIIAV
TFTNKAAKELRERVRELIGTDQSGMWIGTFHALSHRFLCSNYIDANLPKDFQILDADDQL
RLLTRLMKGMNIDQKKWVPRQGVWYINDKKEKGLRPNQLKKSFYQVDQMWLRVYEVYQEA
CNRSGLVDFTELILRVCELWQSKSEILHNYHRQFTNILVDEFQDTNALQYSWLRTLSGKN
SKVVIVGDDDQSIYGWRGAQTKNIQQFFKDFPLATTMRLERNYRSTFNILKAANTLIANN
NRRLGKELWTAASDGEPILLYRALNVFDEARFVVNCIELHAKDRKSLRDCAVLYRNNSQS
REVEEALVQRNIAYQIYSGIRFFQRKEIKDSIAYLRLIANRNDDVAFERAVNTPRRGIGL
HTLEMVRRISCKRQITLWQASQELLKNEGLSAHAAVSSLKRFIQLIDSLEKLTSYMPLHM
QTERILKDSGLWLMYSKEKDEKGQTRIENLEELINTTRQYYSDPNEDTNFISLKLFLAQA
ALDINIDDGVQNQDAVQLMTIHASKGLEFPQVFIIGMEEGVFPSQFAVQESHRLEEERRL
AYVGVTRAMKRLILSYTTIRRIYGKEVSYPISRFVNEIPDICINKVEYNSQNNLALKYNT
THDKSIIHSSGFSIAQRVQHEKFGEGIIVHITGHGEQTRLQVNFRQQGVKWLVALYAKLK
IR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcttctgatctgctattgcatttaaacatgcaacagcgtgtagctgtatccgca
ccgcgttcaaattttttggtattagcaggagctggtagtggaaaaacccgtgtattatct
tatcgcattgcttggttaatagaaatagaaaaatgctctcctcagtcaattatcgcagta
acctttactaataaagcagctaaggagctgcgcgaaagagtaagagaattaattggcact
gatcagagtggcatgtggattggtacttttcatgctttatcccaccgttttttatgttct
aactatattgatgccaatttaccaaaagattttcagatccttgatgctgatgatcagttg
cgtttactcacacgcttaatgaagggtatgaacattgatcagaaaaaatgggtacctcgt
cagggcgtttggtatataaatgataaaaaagaaaaaggcttgcgcccaaatcagttaaaa
aaatctttttatcaggttgatcagatgtggttacgtgtttatgaggtttatcaagaggcc
tgtaatcgttctggattagtagattttactgagttgatcctacgtgtctgcgaattatgg
cagtctaaatcagagattttacacaactatcatagacagtttactaatattttagtagac
gaatttcaagatactaatgctcttcaatattcctggcttcgtacgctctctggaaaaaat
agtaaagtagtgattgttggtgacgatgatcaatcaatttatggatggcgaggcgcgcaa
acaaaaaatatccagcaattctttaaagattttccattagcaactactatgcgtctcgaa
agaaattatcgctcaacctttaatatccttaaagctgcaaatactttaatagctaataat
aatcgtcgcttaggcaaagaactgtggactgcggcctctgatggggagccaattcttctt
tatcgcgccttaaatgtatttgacgaagcgcgctttgtagtcaattgtattgaattacat
gcaaaggaccgcaagtcgctacgtgattgtgctgtattatatcgtaataattcgcagtcg
cgagaggtagaagaggcattagtacaaagaaacattgcatatcagatttacagtggtatt
cggtttttccaaagaaaagagataaaagattccatcgcgtatttgcgcttaattgctaat
cgaaatgatgatgttgcttttgaacgtgctgtgaatacccctcgcagaggtatcggcctt
catacccttgagatggtgcgccggatatcatgtaagcgtcagataacattatggcaagcc
tctcaggagttattgaagaatgaaggactgtctgcccatgcagccgtttcttctttaaag
cgctttattcaattaatagattctttagagaaattaactagttatatgccattacatatg
caaacagagcgtatccttaaggattccggtctgtggttgatgtattcaaaagagaaagat
gaaaaaggtcaaacacgtattgagaatttagaggaattgataaatactactagacagtat
tatagtgatccaaatgaggatactaattttatttctcttaaattatttttagctcaagct
gcactagatataaacatagacgatggtgtccagaaccaggatgctgtgcagctaatgact
atacatgcctctaaaggtcttgaatttccacaggttttcattattggaatggaagaaggt
gtctttcctagccagtttgctgtacaagagagccataggctagaggaagagcgtcgtctt
gcctatgttggtgttacccgtgcaatgaaaagactgatcttgagttatactacaatccga
cgtatctatggtaaggaagtatcttatccgatctcgcgctttgttaatgagataccagat
atatgtataaacaaagtagagtataattcacaaaacaatctagccctgaaatataatact
acacatgataaaagtattatacatagcagtggattttcgattgcgcagagggtacaacat
gaaaaatttggtgaagggataattgttcatatcacagggcatggtgagcagacacgccta
caggtgaattttcgacaacaaggtgttaaatggttagtggctctatatgccaagctaaaa
attagataa
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