Candidatus Erwinia haradaeae: ERCIPSTX3056_284
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Entry
ERCIPSTX3056_284 CDS
T05981
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
ERCIPSTX3056_284 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehd03019
]
ERCIPSTX3056_284 (orn)
03009 Ribosome biogenesis [BR:
ehd03009
]
ERCIPSTX3056_284 (orn)
Messenger RNA biogenesis [BR:
ehd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ERCIPSTX3056_284 (orn)
Ribosome biogenesis [BR:
ehd03009
]
Eukaryotic type
Pre-60S particles
RNases
ERCIPSTX3056_284 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
VFP86859
UniProt:
A0A451DJH3
LinkDB
All DBs
Position
1:444617..445162
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AA seq
181 aa
AA seq
DB search
MILSINNLIWIDLEMTGLNPDRDRILEIAILVTNSDLQIISKGPVFAIYQSMELLGMMDQ
WNIKAHTASGLISRVQNSKISERSAEIEILKFLKPLVPAKCSPMCGNSVAQDRRFLFKYM
PDLENYFHYRYLDVSTLKELARIWKPEILLGVQKKGAHRALDDIYDSIAELVYYRQYFIR
C
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgattttaagtattaataacctaatatggattgatcttgagatgactggtttaaatcca
gacagagatcgtattcttgaaattgcaatacttgtaacaaattcggacttgcaaattatt
tctaaaggaccggtttttgcgatataccagtccatggagcttctaggcatgatggatcaa
tggaatataaaagcacacactgctagtggtttaataagtagggtacagaatagcaaaata
agtgaacgttctgctgaaattgaaattttaaaatttctaaaaccattagtacccgctaaa
tgctcacccatgtgtggtaatagtgtagctcaagatcgtcgttttttgtttaagtatatg
ccagatttggagaattattttcattatcgttatctagatgtcagcaccctaaaagaacta
gcacgtatttggaaaccggaaattttattgggagttcaaaaaaaaggtgcacatcgagca
ctagatgatatttatgattccattgcagaactagtctactatcgtcaatattttatacgc
tgctaa
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integrated database retrieval system
