Candidatus Erwinia haradaeae: ERCIPSTX3056_288
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Entry
ERCIPSTX3056_288 CDS
T05981
Symbol
holD
Name
(GenBank) DNA polymerase III subunit psi
KO
K02344
DNA polymerase III subunit psi [EC:
2.7.7.7
]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd03030
DNA replication
ehd03430
Mismatch repair
ehd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ERCIPSTX3056_288 (holD)
03430 Mismatch repair
ERCIPSTX3056_288 (holD)
03440 Homologous recombination
ERCIPSTX3056_288 (holD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehd03032
]
ERCIPSTX3056_288 (holD)
03400 DNA repair and recombination proteins [BR:
ehd03400
]
ERCIPSTX3056_288 (holD)
Enzymes [BR:
ehd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ERCIPSTX3056_288 (holD)
DNA replication proteins [BR:
ehd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ERCIPSTX3056_288 (holD)
DNA repair and recombination proteins [BR:
ehd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ERCIPSTX3056_288 (holD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_III_psi
Motif
Other DBs
NCBI-ProteinID:
VFP86863
UniProt:
A0A451DJK9
LinkDB
All DBs
Position
1:451762..452163
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AA seq
133 aa
AA seq
DB search
MLIRRREQLLQQIGITQYALKRLHVLQGDVLINLPIETRLVIVADKPPALTDPIVENVLR
TLNLRSIEVQVATTHQLSLLPQDNHHHRWLLGVQPSKVFTGIQITSPILSELHYNPSAKR
ALWKQIYQYQLDP
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgttgataagacgtcgtgagcagttgttacaacaaataggtattactcagtatgcacta
aagcgacttcatgtcctacagggggatgttctaattaatcttcccatcgaaactcgtttg
gttatcgttgcagataaaccgcccgctttaacagatccaatagtagaaaatgtattacga
accttaaatttaagatctatagaagttcaggttgcaactacgcatcagttatcattatta
ccacaagataatcatcatcacaggtggttgctaggggttcaaccttctaaagtttttacc
ggaattcaaattacgtcacctatattatcggaacttcattataatccaagcgccaaacga
gcgctttggaaacaaatctatcaatatcaattagatccctag
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