Candidatus Erwinia haradaeae: ERCIPSTX3056_313
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Entry
ERCIPSTX3056_313 CDS
T05981
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd00300
Lysine biosynthesis
ehd00470
D-Amino acid metabolism
ehd01100
Metabolic pathways
ehd01110
Biosynthesis of secondary metabolites
ehd01120
Microbial metabolism in diverse environments
ehd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ERCIPSTX3056_313 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ERCIPSTX3056_313 (dapF)
Enzymes [BR:
ehd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ERCIPSTX3056_313 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
VFP86887
UniProt:
A0A451DJR7
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All DBs
Position
1:501126..501950
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AA seq
274 aa
AA seq
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MHFSKMHGIGNDFMVVDAITQNIYFSSELIRRLSNRHYGVGFDQLLIIESPSDPDIDFHY
RIFNADGSEARQCGNGARCLARFLRLHGLTNKHDICVSTQSGCIVLHVISDDMVSVNMGE
PDFLPENIPFYAKAQKKSHVIRVAATSIKCGVVSIGNPHCVLQVDNIKTAAVQRLGEAIA
NHKRFPKQVNVGFMEMINPKHILLRVFERGSGETLSCGSGACAAVAVGIQQENLADTVRV
DLSGGSLSVSWKGEGNPLYMTGSATHVYDGYIHI
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtgcacttctcgaagatgcacggtattggtaatgattttatggtcgttgatgcaataacg
caaaatatttatttttcttcagagttaatccgtcgtctctctaatcgtcattacggggtt
ggttttgatcagttactcatcatagaatcaccttctgatcctgatattgattttcattac
cgtatttttaacgccgatggtagtgaagcaagacaatgtgggaatggagctcgctgtctt
gctcgctttttaaggttgcacggtctaacaaataaacatgatatttgtgtgagtacgcag
tcaggttgtatagtattgcatgttatttcagacgatatggtatctgttaatatgggagag
ccagattttttgccagaaaatatccccttctacgcgaaagcacaaaaaaaatcacacgtt
attcgtgttgccgcgaccagtatcaagtgcggggtggtatcgattggcaacccacattgt
gtattgcaggttgataacatcaaaacagctgctgttcaacggttaggtgaggctatcgca
aaccataagcgctttcccaaacaagtaaatgttggttttatggaaatgataaaccctaag
catattcttttgcgtgtttttgaacgtggatcaggtgaaaccttatcatgtggtagtggg
gcttgtgcagcagtggctgttggtattcaacaagaaaatttagcagacacagtgcgggta
gacttatccggtggatcattgagtgtttcctggaaaggagaaggaaaccctttatacatg
acaggatctgctacacatgtgtatgatggttatattcatatctaa
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