Candidatus Erwinia haradaeae: ERCIPSTX3056_387
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Entry
ERCIPSTX3056_387 CDS
T05981
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ehd
Candidatus Erwinia haradaeae
Pathway
ehd00470
D-Amino acid metabolism
ehd00550
Peptidoglycan biosynthesis
ehd01100
Metabolic pathways
ehd01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ERCIPSTX3056_387 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ERCIPSTX3056_387 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
ERCIPSTX3056_387 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ehd01011
]
ERCIPSTX3056_387 (ddlB)
Enzymes [BR:
ehd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
ERCIPSTX3056_387 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ehd01011
]
Precursor biosynthesis
Amino acid ligase
ERCIPSTX3056_387 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATPgrasp_YheCD
ATPgrasp_Ter
TTL
RimK
Motif
Other DBs
NCBI-ProteinID:
VFP87014
UniProt:
A0A451DJZ5
LinkDB
All DBs
Position
1:610867..611787
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AA seq
306 aa
AA seq
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MAGKVAVLMGGCSSEREISLLSGQAVLHGLKGIGVNAYPVDTRDFPIVQLKQEGFIKAFI
TLHGQGGEDGTIQAVLEHLKIPYTGSRVLASALSIDKIQSKYLWKGYGLSTSPFISLHQS
QINGGLSQKIKRKLSQLGLPVFVKPNCSGSSLGVSRVNYISDLEPALINAFRYDKKILIE
AFLSGDEYTVGVIGTTVLPSLRIQCSREFYNYHAKYISRDTKYFCPSGLSIQQEEDLKSL
SLAAWNALGCAGCGRIDVMADSAGRFYLLEVNTSPGMSNHSLLPMAASKAGISFSELVGR
ILDLAN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaagtagcagtcttgatgggaggttgctcttcggagcgtgagatctctcta
ttgtcaggacaggccgttttgcatggcctaaagggtattggagttaatgcttatcctgta
gatacacgtgattttccgattgttcaattaaaacaagagggatttattaaagcctttatc
acattacatggacaaggtggtgaagacggtacaattcaggccgtgttggagcacctgaag
attccttatactggaagcagagtcttagcttctgctctgagtatagataaaatacagagt
aaatatctatggaaaggttatggtctttcaacatctccttttatctcattgcatcagtcg
caaataaatggaggcttatctcagaaaataaaaagaaaacttagtcagctaggactacct
gtatttgttaaaccgaattgttcaggatccagtctaggtgtctcacgtgtaaattatata
tcagatttagagccagcattaataaacgcttttcgttatgataaaaaaatattaatagaa
gcgtttctcagcggcgacgagtatacggtcggcgtaattggtacaacagtcctaccgtcg
ttgcgaattcagtgctctagagaattttataactatcatgccaaatatatttcgcgtgat
accaaatatttttgcccatcaggtctaagtattcaacaagaagaggatttaaaatccttg
agtcttgcagcatggaatgcactaggctgtgcaggatgtggccgcattgatgtaatggca
gattctgctggacgtttttatttgctagaagttaatacttcccccggaatgagtaatcac
agtttactaccaatggcagctagcaaggcgggaataagtttttcagaacttgtagggcgt
atcctagatttagctaattaa
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