Candidatus Erwinia haradaeae: ERCIPSTX3056_515
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Entry
ERCIPSTX3056_515 CDS
T05981
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ehd
Candidatus Erwinia haradaeae
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehd03016
]
ERCIPSTX3056_515 (truB)
Enzymes [BR:
ehd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ERCIPSTX3056_515 (truB)
Transfer RNA biogenesis [BR:
ehd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ERCIPSTX3056_515 (truB)
Prokaryotic type
ERCIPSTX3056_515 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
VFP87358
UniProt:
A0A451DKW0
LinkDB
All DBs
Position
1:complement(830032..830976)
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AA seq
314 aa
AA seq
DB search
MSDSYDPRRNVHGVLLLDKPYGISSNQAVQQVKRIYNAKRAGHTGSLDPIATGMLPICLG
ESTKFAQYLLNADKHYRVIARLGQRTDTADVSGVLLSERPVTFNANMLEEVLDSFCGDTE
QIPPMYSAIKYKGRKLYEYARAGVHVPGKSRKISVSMLQCIRYEGNELELDLRVSKGTYI
RTIIDDLGEKLGCGAHVCYLRRLQVSNYLTTQMITMQSLKAILNDKKDIDSRSQNLLDSL
LMPMDSPIAHYPSVNLSSIMARYLKNGCLVSLVNAPANGLVRVTEGVESNFVGIAEIINN
SLLVPRRLLSRSSS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattcttatgatccgcgtcgtaatgttcatggagttctgcttttagataaacct
tacggcatctcctcaaaccaggctgtgcaacaagttaagcgcatatataatgcgaagcgg
gcaggacacactggctcactggatccaatagcaacaggtatgctgcctatctgtttaggt
gagtccactaagtttgcacaatatttattgaatgcagataaacattatcgtgtgattgcc
cgactcgggcaaaggactgatacagcagatgtaagtggtgtgctattaagcgaacgtcca
gtgacgtttaatgctaatatgcttgaggaggttctagatagtttttgtggagacacagag
caaattccacccatgtactcagcgataaaatataagggacgtaaattatacgagtatgca
cgtgcaggagtgcatgttccaggtaaatcacgcaagatttcggtgagtatgctacaatgt
atacgctatgagggaaatgaattagagctagatctgcgtgtatcaaaaggaacatacatt
cgaactatcatcgatgaccttggtgaaaaactaggctgtggtgcacatgtgtgctattta
cgtcgcttacaggtttctaattatcttacgacccagatgattactatgcagtctcttaag
gctatacttaatgacaaaaaagatatcgactctagatcacaaaaccttcttgattctctg
ttgatgcctatggatagtccgatcgctcattatccatcggttaatttgtcaagtattatg
gctcgatatttgaaaaatggttgcttagtatcattagtgaatgctccagccaatggctta
gttcgcgtaactgaaggagtggagtctaattttgttggaatagcagagattatcaataat
agtctattggtaccacgtaggctcttatctagatcttcttcttag
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