Candidatus Erwinia haradaeae: ERCIPSTX3056_650
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Entry
ERCIPSTX3056_650 CDS
T05981
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ehd
Candidatus Erwinia haradaeae
Brite
KEGG Orthology (KO) [BR:
ehd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehd03016
]
ERCIPSTX3056_650 (truA)
Enzymes [BR:
ehd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ERCIPSTX3056_650 (truA)
Transfer RNA biogenesis [BR:
ehd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ERCIPSTX3056_650 (truA)
Prokaryotic type
ERCIPSTX3056_650 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF1572
Motif
Other DBs
NCBI-ProteinID:
VFP87728
UniProt:
A0A451DLU9
LinkDB
All DBs
Position
1:complement(1032865..1033668)
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AA seq
267 aa
AA seq
DB search
MLNSIIKLAFGVEYDGTHYCGWQRQREAHSVQEELERAIAKIANHVINVVCAGRTDAGVH
AIGQVIHFETISKRKDIAWIRGVNSHLPADIVVCWVKVMPNSFHARFSAISRSYRYIIYN
HPHHRSAIFSAGVTYFGDFLDTDKMQRSAQCLLGENDFTSFRSRQCQSQSPKRSVIDLTV
TRHGLYVFIDIQANSFVHHMVRNIVGSLIEVGCGHQPEDWIGNVLLNKNRQLAAATAYAQ
GLYLMLVRYPLYYSVPQTSAETFSLIH
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgctaaattctattataaaattagcattcggcgttgaatatgacggaactcattattgc
ggatggcagagacagcgtgaagcgcatagcgtacaagaagagttggaacgagcaatagca
aaaattgctaatcacgtgatcaatgtagtttgcgcaggacgtacagatgcaggggtccat
gctattgggcaagttattcattttgaaactatatctaaacgtaaggatatcgcctggata
agaggcgttaattctcatttgccagcggatattgttgtctgttgggtaaaagtgatgcca
aattcgttccatgcgcgttttagtgctatttcgcgaagctatcggtatataatctataat
cacccgcatcatcgttctgctattttttccgctggtgttacatattttggtgatttttta
gacacggataaaatgcaacgttcagctcagtgtcttttgggtgaaaatgatttcacatca
tttcgttctaggcaatgtcaatcacagagcccgaagagatctgtgattgatcttaccgta
acaaggcatggtttatatgtttttattgatatccaggctaactcctttgttcatcatatg
gtgagaaacatcgtcggtagcttaatagaggttggttgtggtcatcaacctgaggattgg
atcggtaatgttttattaaacaaaaatcgtcaactagctgctgcgactgcatatgctcag
gggctatatttaatgttagttcgctatcctctttattattcagttcctcagacttcagca
gaaactttttctttaattcattga
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