Encephalitozoon hellem: EHEL_011020
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Entry
EHEL_011020 CDS
T02287
Name
(RefSeq) hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
ehe
Encephalitozoon hellem
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehe03016
]
EHEL_011020
Enzymes [BR:
ehe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
EHEL_011020
Transfer RNA biogenesis [BR:
ehe03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
EHEL_011020
Prokaryotic type
tRNA splicing ligases
EHEL_011020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
13467254
NCBI-ProteinID:
XP_003886706
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All DBs
Position
I:105280..106713
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AA seq
477 aa
AA seq
DB search
MEGIDQTDLCIKVSPLFNASMKTSATIYVDEELRKPVMEELDAGASISSIGQISDVCSLP
GLIGDVIGLPDIHTGYGFPIGCVAAFDINNPESVVSPGGVGYDINCGVRALRTNLDIKCL
KEKAESLADELFGIIPTGMGSDKRSRISLGTLNSILDQGLDYLLKSKEIPDEDVEYCESN
GHMDGDSRLINQKSKGRGLNQLGTLGSGNHYLEVQYVDEVYNAEKAEVMGIRKDQIVLMI
HTGSRGLGHGVCHDSLMKMAGKNADHSQLACSPYSSKESQEYLLSMGCAANFAFVNRAVI
TKKARQAFEKVFPGSRLDLIYDVCHNIAKVESHRSHGMEYDAIVHRKGASRAFPPGHPDI
PWKYKEIGQPVIVGGSMGTYSYILCGSEKSMELSFGSTCHGAGRVLSRSRSKDLFTHKNV
CDLLRSQDIVFRCPNDPGMVEESPGCYKDINRVVDLSDRIGLTEKVCRMKPCLVIKG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagggcatagaccaaactgacctctgcatcaaggttagtccgttgtttaatgcgtcc
atgaagacctctgcaactatatatgttgatgaagagctgagaaagccggtgatggaagag
ctagatgctggtgcgagtatatcctctattgggcaaatatctgatgtttgttccttgcca
gggcttattggagatgtcataggattaccagacatacacactgggtatggatttccgatc
gggtgtgttgcggcatttgacattaacaatcccgaatctgttgtaagtccgggaggggta
gggtacgacatcaactgtggggtcagagcactgaggactaacctcgacataaaatgcttg
aaagaaaaggcggaatctctcgcggacgaattgtttgggataatacccacaggaatggga
agcgacaaaagatcgaggataagcttaggcacactgaactcgatcctagaccaaggattg
gactatctgttgaaatcgaaggagatacctgatgaggatgtcgaatattgtgaaagcaat
ggccatatggatggagacagccgcctgatcaaccagaaatcaaaggggagggggctgaac
cagctcgggactcttggatctgggaaccattacttagaagtgcagtatgttgatgaggta
tacaatgcagagaaggcagaagtaatggggataagaaaggaccaaatagtactgatgatc
catactgggagcagaggtcttgggcatggagtgtgccacgactcattaatgaaaatggcg
ggaaagaacgccgatcactcccaacttgcatgttctccctacagttctaaggaatcccag
gaatatcttctatccatgggatgtgcagcaaactttgcctttgtcaacagggccgtgata
accaagaaggccaggcaggcatttgagaaggtgtttcctggatcaagactcgacttgatt
tatgatgtttgccataacattgcaaaggtagagagccataggtcccatggaatggaatat
gatgccattgtacataggaaaggagcatcaagagcatttcccccaggacacccggatatt
ccatggaagtacaaggagatagggcagccggtgatagtggggggatccatggggacatac
agttacatcctatgtggctccgagaaatccatggagttgagctttggatctacatgccac
ggggcaggtcgcgtcctctctagaagcagatcgaaggacctgtttactcacaagaacgtg
tgcgatctcctaaggagtcaagacatagtattcagatgccccaacgatcccgggatggtt
gaggaatcacctggatgctacaaggacatcaatagagttgttgacttaagcgatagaatt
ggactgacagagaaagtttgtcggatgaagccatgtctggttattaaaggatga
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