Encephalitozoon hellem: EHEL_040210
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Entry
EHEL_040210 CDS
T02287
Name
(RefSeq) RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH subunit SSL1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03022
Basal transcription factors
ehe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EHEL_040210
09124 Replication and repair
03420 Nucleotide excision repair
EHEL_040210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehe03021
]
EHEL_040210
03400 DNA repair and recombination proteins [BR:
ehe03400
]
EHEL_040210
Transcription machinery [BR:
ehe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EHEL_040210
DNA repair and recombination proteins [BR:
ehe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EHEL_040210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
Tfb4
C1_4
zf-HIT
Motif
Other DBs
NCBI-GeneID:
13468192
NCBI-ProteinID:
XP_003887054
LinkDB
All DBs
Position
IV:20700..21722
Genome browser
AA seq
340 aa
AA seq
DB search
MAKQFSWEQEYKRTWEDRNDRKVNEFNMETETFYSNNRKGIVRHLHVIVDVSEAIDKSDF
LPTFRTNVARILEDFIPSFYNENPLSTLSFLSTRDVCVKYISSMDMDIHAFLGQTGSKWF
SLLNGLEGSIEIMENTMHVKEILVIVASTSTRDPHGYTEVLNRLKTHNIKVHFISLCGEV
TLYKSISKATGGRFYVPIDVGHLSMIMKELSHPTDFNGTTLSLVKIGFPLPTMESSVCAC
HLEVKSVGYECPVCKTMVCSLPISCPICNTQLVSTLNLSKSLRFIYPLKPFIERAEDACR
ICQNKGAYQCDLCKSTYCSYCNGFVHSTLSFCIYCELPHN
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacagttttcttgggaacaggaatacaaaagaacatgggaagacagaaatgat
agaaaggtgaatgagtttaacatggagaccgaaaccttttacagtaacaatagaaagggg
atagtgaggcacctccatgtcatagtagatgtctctgaggcaatagacaagtctgacttc
cttcccacgttcaggacaaatgtggcaaggatccttgaggactttattccatcgttctac
aatgagaaccctttgtcgaccctctcttttcttagtactagagatgtttgtgtgaagtac
ataagtagtatggacatggacattcatgcatttctcggacagacaggttcaaaatggttt
tcactgctaaatggactcgagggatccatagagatcatggaaaacaccatgcatgtcaaa
gaaatccttgtaatcgttgcaagcacatctaccagagatccccatggatacactgaggta
ctaaatagactcaagacacataacataaaggtccatttcataagtctatgtggtgaggtt
actctgtataagtcaatatctaaggccactggaggaaggttttatgtcccaatcgacgtg
ggccacctatccatgatcatgaaggagctgtcccatcccacagacttcaatgggacaacg
ctcagtctagtcaaaataggctttcctctgccaacaatggaatcctcggtatgtgcctgc
catttggaagtgaagagcgttggatacgaatgcccagtatgcaagaccatggtctgctcg
cttcccatatcgtgtccaatatgcaacactcagcttgtatccacgttgaatctctcaaaa
tccctacgatttatttatccactaaagccatttatcgagagggcagaagacgcatgcaga
atatgccaaaacaaaggcgcgtatcaatgtgatctctgcaagagcacatactgcagctat
tgtaatgggttcgttcatagcactttgagcttctgtatctactgtgaattgccacacaac
tag
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integrated database retrieval system
