Encephalitozoon hellem: EHEL_050390
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Entry
EHEL_050390 CDS
T02287
Name
(RefSeq) RSC chromatin remodeling complex subunit RSC8
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EHEL_050390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehe03021
]
EHEL_050390
03036 Chromosome and associated proteins [BR:
ehe03036
]
EHEL_050390
Transcription machinery [BR:
ehe03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EHEL_050390
Chromosome and associated proteins [BR:
ehe03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EHEL_050390
PBAF complex
EHEL_050390
GBAF(ncBAF) complex
EHEL_050390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
SWIRM
Myb_DNA-bind_6
SWIRM-assoc_1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
13468326
NCBI-ProteinID:
XP_003887231
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Position
V:complement(51494..52696)
Genome browser
AA seq
400 aa
AA seq
DB search
MENIFPLQENVEIEEIYGSKRPNANPPKDSKAFRMKSGAQDFMDVETYHVRLPSWFRKGE
VSPLEFNCMGEVIQAIGKEEYVRNRDRIIGSYEEGNRPITIGGALALVDIDIEMMLKIFS
FIERWGLINYRSLIEKEIRNLRSYDGVDTKSMEDVPKEECPKERVDVKEQLEKAACGCGG
KATFFTRSLVFRCTKCIDDGDYPQEVLRSDFIPITESLVKQMWSKKEEFLLLEGISKFGD
EWESVSQYVQTKTKEQCIFHFLRLPILENTLSKADLSIGKLFETAENPIMCIVAFVCGIV
HPKVASECAKTAIKYISECSQDSVIQHILDAGRRKAHEQRDLERRKIERLKNVICEALLN
KIKMKIGTYKELYLSTQRVRSELIALRRGLAEDINPGGDE
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacattttcccgttgcaagaaaatgttgagatagaagagatttatggaagcaag
aggcctaatgcaaaccccccgaaagattccaaagcatttagaatgaagagtggagcccag
gactttatggatgtcgagacataccacgtaaggttgccaagctggtttcgaaagggtgag
gtgagcccattagaattcaattgcatgggcgaggttatccaagcgattggaaaggaggaa
tatgtgcggaacagagacaggataattggcagttacgaagaaggaaacaggccaataacg
attggaggggcacttgcattagtagatatagatattgagatgatgttgaaaattttttcg
tttattgagagatgggggctaatcaattatcgtagcctgattgaaaaggagataaggaat
cttaggtcgtatgatggtgtggatacaaaatccatggaagatgttccaaaggaggagtgc
cctaaagaaagggttgatgtgaaggagcaactggagaaggcagcttgtgggtgtggggga
aaagcaaccttttttacaaggtctttggtgttcagatgcactaagtgtattgacgacggc
gattatccgcaagaggttctaagatctgattttattcccatcactgaatctctggtaaag
caaatgtggtcaaagaaggaagagtttcttctgttggaggggattagcaagtttggggat
gagtgggaatctgtaagccaatatgtgcaaaccaagacgaaggagcagtgcatattccat
ttccttcgtcttcctatattggaaaacacactttcaaaggcagaccttagtatcggtaaa
ctgtttgagacggcagaaaacccgattatgtgcattgttgcttttgtatgtggaattgtt
catccgaaggttgcgtctgaatgtgcgaagacagctatcaagtacataagtgaatgttct
caggactctgtcattcagcacatactagatgcaggaagaagaaaggcacatgaacaaagg
gatttggaaagaagaaaaatagaaaggctcaagaatgtaatatgcgaagcattgttgaat
aagatcaagatgaaaataggaacatataaggaattgtatttatccacacaaagggtacgc
agtgagctgattgcactaagaagagggcttgcagaggatataaaccctgggggtgacgag
tga
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