Encephalitozoon hellem: EHEL_060720
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Entry
EHEL_060720 CDS
T02287
Name
(RefSeq) symplekin domain-containing protein
KO
K06100
symplekin
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EHEL_060720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehe03021
]
EHEL_060720
03019 Messenger RNA biogenesis [BR:
ehe03019
]
EHEL_060720
Transcription machinery [BR:
ehe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EHEL_060720
Messenger RNA biogenesis [BR:
ehe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
EHEL_060720
U7-dependent histone pre-mRNA processing factors
EHEL_060720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
MJ1010-like_2nd
Motif
Other DBs
NCBI-GeneID:
13467346
NCBI-ProteinID:
XP_003887425
LinkDB
All DBs
Position
VI:complement(95792..97570)
Genome browser
AA seq
592 aa
AA seq
DB search
MEKIRYHLVERYSEEGLTFLIFYLRNMSPIETVYFFCTALKVLDRDSAVALLAYLRHAHS
KGMACPRYAQRSVNYHVHMLNKRIAKKIPSILGRFASEMKLFDFTEVRGRKVGEEVKREL
DPFSLLIDLVFETLVKSSNIEIENTIQTYFHEKQEEERPGPVTEAFNLLGRIKEAGAIDV
GISRIVRMLDPRDSLDALVFMSKNERYSHSFFMYAYLLNRDVYDAMVDLILESRQYFRVD
IVKHLVSLDIEKVLEKITDETVEILGHMVKERRAHVKEIVEMISEGRVNVSRENVLEVFK
ENYETLGEYASYFKLSDQELIEVSKSNDDALPLALDAVDTQESMNSFVDLLKEKEDSAVI
NLIKSMGEDQRKEALIQTILRRRVVKGQLRVYLLDNYSDDDRFIYDFLPYLEKSDVYKYI
PDYVVDAESLNTFLKVIECSELLIFAHKIPDVSKAIRILDLCFKSPRFSESDFLFTLTTL
EKELPLLIVRTLIQTLLKFPNLKNFVVSFLSRLARRNIWKQEEMVEGVVRCFEIVGPAAV
DIVMYLDPDAMSKALGKSKGLRSLCREYLRKEASGKRHDSALRSVLSKFGNK
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagataagataccacctagtcgagaggtattctgaagagggcctgacctttctt
atcttttacctcaggaacatgagtccaatagaaacggtgtacttcttctgtactgcattg
aaggtactggatagagacagtgctgtggcactccttgcatacctcaggcatgcacatagc
aaggggatggcgtgtccgaggtatgcacagaggtctgtcaactaccatgtgcacatgctg
aacaaaagaatagcaaaaaagattccgagcattcttgggcgctttgcttctgagatgaag
ctctttgactttacggaggtgcggggaaggaaagtgggagaagaggtaaagagggagctt
gatcccttcagccttcttatcgaccttgtttttgagacgcttgtcaaaagcagcaacatt
gagattgagaacaccatccagacatacttccatgagaagcaggaggaggagcgtccaggc
cctgttaccgaagcctttaatctgcttggaaggatcaaggaggcgggtgcaatagacgta
gggatttcgaggattgtgaggatgcttgatccccgagactcgttggatgcactagtgttt
atgagcaagaacgagaggtacagccattcattctttatgtatgcatacctgttgaaccgg
gatgtttacgacgccatggtcgacctgattcttgagagcaggcagtacttcagggttgac
attgttaagcatcttgtttcgctcgacatagagaaggttctggagaagataacagatgag
actgtggagatattgggccatatggtcaaggaaaggagggcacatgttaaggagattgtg
gagatgatttccgagggaagagtgaatgtctctagagaaaatgttctggaagttttcaag
gagaactacgagactcttggcgaatatgcatcctactttaagctgagcgaccaggaactg
atcgaggtttcgaaatcgaatgacgatgccctgcctcttgcattggacgctgttgacacg
caagagagcatgaacagctttgtcgatctattgaaagaaaaggaggacagcgctgtgatc
aacctcatcaagtctatgggagaagaccaaagaaaggaggccctcatacagacgatcctt
aggaggagggttgtcaagggccagctcagagtctacctactggacaactactcggacgat
gaccgatttatatatgattttctaccgtatttggagaagtccgatgtatacaaatacatt
cccgactatgttgttgacgccgagtcattgaatacgtttctgaaggttatagaatgttcc
gagcttctgatttttgcacacaagattccggacgtctcgaaggccatacggattctcgat
ctctgcttcaaatcgccaagattcagcgagagcgactttctgtttacgctaaccaccctg
gagaaggagctgcctctcctgattgttcggacgttgatccaaaccctgctgaagtttcca
aacctgaagaactttgttgtctcatttctgtcgaggttggccagaaggaacatatggaag
caggaggagatggtggagggtgttgtaaggtgctttgagatagttgggcctgcagcggtt
gacattgttatgtatctggaccctgatgcgatgtctaaggctctagggaagagcaagggg
cttagaagtctgtgccgtgagtatttgaggaaggaggcgtctggaaagcgccacgactct
gcactgaggtctgtgctgagcaagtttggtaataaataa
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