Encephalitozoon hellem: EHEL_070040
Help
Entry
EHEL_070040 CDS
T02287
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHEL_070040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehe03021
]
EHEL_070040
Enzymes [BR:
ehe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHEL_070040
Transcription machinery [BR:
ehe03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
EHEL_070040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
13467827
NCBI-ProteinID:
XP_003887513
LinkDB
All DBs
Position
VII:5590..9534
Genome browser
AA seq
1314 aa
AA seq
DB search
MLKRVEEDEVDIRIRRISFGLLSPQDISSLSVHEISSKDLYDISTRVPLSNGPLDLRLGV
GNKKDKCATCGEGLATCIGHFGEVKLVLPVFNIGLIKSTISTLNCLCKSCGCILLSEKKK
IYFKKKLRESTGGNDTKLILRKVIAECKKANMCFVCSSRNGQVKKTFGFRIVHEIEDPEK
RKKDRSAKGGTHFSHYEDINPLTALNVFKMMKEDDYELLGFSESPERLIIQNVIVPPSCI
RPSVSMDDEGTNEDDITIKISEIVHTNKVLKEGIEKGNPLNLINEDWDHLQLQCALLINS
ELPQVGIPGQPVRGIVQRLKGKNGRFRCNLSGKRVDFSGRTVISPDPNLSIEEVGIPERM
AKILTISERVTSFNKKKLQSLVLNGPEKYPGANYVVGEKFKRFLMYGKRDTELKHGEIVE
RHLLDGDMVLFNRQPSLHRMSIMSHKVKVHNSKTLRFNECVCTPYNADFDGDEMNVHVPQ
TEKARAEASILMSVSNNIVTPRHGEPIIAATQDFITGLYLITGKDTFFDRERFGQLVSYF
SETRINVKPAIKKPVELFTGKQLVEALIKDSFYGSSEGAMSLQDKSISLIGKNRSFKSFS
DPNDGSVVILDNAYYFGRLDKSIIGGENKKDSLIYAIMKVSNKAAVRVMNSITKLCSRYL
GEVGFSIGLDDVQPGPILRQKKEMVVNKGYSECKNKILEHSKRLESNEEVLEMEISSILN
RIREECGSICIKELSIRNSPNTMQACGSKGSKINVSQMVACVGQQIVSGTRIPNGMDDRC
LPHFRKGSKTPESKGFVLNSFFDGLTSPEFFFHAVSGREGLVDTAVKTAETGYMQRRLMK
ALEDLSIQYDGSVRNSNMEVVQFAYGEDQIDPVMSEGDDPFNLERVFLQSKSKFLRNLDL
SQTPYPFELKEQDVVDNLRKSIPKGYPVKRIVNKRFIQSLLEFIESKREDRFLLDGTFYS
YFSCDGFAKIFFSTISQKMMDLIIEPGTTVGAIAGQSIGEPGTQMTLKTFHFAGVASMNI
TLGVPRLKEIINAVCNISTPIINAELDDPYNLFRAEVIKGRIDKISLKDVCCLITEVIGK
DEIFLDVTIDLETLSRLKLNLDIHKIEKSLNLPDQTKVTSENSIRVYVKKIDDQSYFNLQ
KVKKKLLGTRICGAPQVSRVIINSNRGHYSLVIEGHGLLNVINTDGVKSSTTTSNSVTEV
EEVLGIEAARAQIIHEIEYTISNHGIKIDPRHIMLLADTMTYRGEVFGITRFGISKMSRS
TLMLASFEQTSDYLFEAAVQSKSDEICGVSESIILGIPICIGTGSMDLYWNSKA
NT seq
3945 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagagagttgaggaagatgaggtggacataagaatcagaagaatatcctttggg
ttgttatctccacaagatatttctagtctgtctgtacatgagatttcaagcaaggactta
tatgacataagtacaagggtgcctctatcaaacgggcctttagatctaaggctgggtgtt
ggaaacaagaaggataagtgtgcaacgtgcggagaagggcttgcaacgtgcattgggcat
tttggggaggtaaagctcgtgcttccggttttcaatatagggctgattaagagtactatt
tcgacgttgaactgcctttgcaagagctgtggatgcattctccttagcgagaaaaaaaag
atatatttcaaaaagaagctgagagaaagtactggaggaaacgatacaaaattgatttta
aggaaagtgatcgctgagtgcaagaaagcgaacatgtgttttgtatgttcttctagaaat
ggacaggtcaagaaaacgtttggatttaggatagtacatgagattgaagacccggaaaag
aggaagaaggataggagtgcgaagggtggaacgcacttttcccattacgaggacataaat
cctctgacggctctcaatgtgtttaagatgatgaaagaggatgactatgagttacttggg
ttttctgagtcgccggaaagacttataatacaaaatgttatagttcctccatcttgcatt
cgtccaagtgtatccatggatgatgagggaacaaatgaggatgacataacgattaagatc
agtgagattgtgcatacaaacaaggtactaaaggaagggatagagaagggaaatccgcta
aatcttatcaatgaggattgggaccaccttcagctccaatgtgcactactcatcaactct
gagcttccacaagttggcattcctggccagcctgtaaggggaatagtccagaggctcaag
ggcaagaacggaaggtttagatgcaatttaagtgggaaaagagttgactttagtggaaga
actgttatttcgcccgatcctaacctaagtatcgaggaggtagggatacctgagaggatg
gcgaaaatactaactatttccgaaagggtcacgagtttcaacaagaagaagctgcaatct
cttgtactgaatgggcctgagaagtatccaggggctaactatgttgttggagagaaattc
aagaggtttctgatgtatggcaagagggatactgagcttaagcatggcgagattgttgaa
cggcacttattagacggggatatggttttatttaataggcagccttctcttcatcggatg
agcattatgtcccacaaggtcaaggtacataatagcaagactcttagattcaatgagtgt
gtttgcacaccttacaatgcagatttcgatggggatgagatgaatgttcacgttccccag
acagagaaagcacgagccgaggcatccattctaatgtctgtttctaataacatcgttact
ccgagacatggggagcctattatagcagccacgcaggacttcattactggactatactta
ataactggaaaggatactttttttgacagagagagatttggccagcttgtgagctatttt
tctgaaactaggattaatgtaaagccagccataaagaagcctgtggagctttttactggg
aaacagctggtggaagcgcttatcaaggactcgttctatggaagcagtgaaggagccatg
agtcttcaagacaaaagcatttctcttataggaaagaataggtcgtttaagtcatttagt
gatcctaacgatggaagtgtggtgatactagacaatgcatactattttggacgtcttgat
aagtcaataataggaggggagaataagaaagatagcctcatctatgcaataatgaaggta
agcaataaagctgcagtgagggttatgaatagtataacaaagctgtgctcaaggtatctt
ggggaagttggatttagcataggacttgatgatgtgcaacctggacccatattaaggcaa
aaaaaagagatggttgttaataaggggtactcggaatgcaagaacaagattttggagcat
tcgaagagattagaatccaatgaagaggttctagagatggagatatcctcgattttgaat
cggattagggaggagtgtggatctatatgcataaaggaattaagcattaggaactctcca
aatactatgcaggcatgcgggtcaaaagggtcgaagattaatgtttctcagatggttgcc
tgtgtgggacagcagattgtaagcggaactaggattccaaacggaatggatgacaggtgc
cttcctcatttccgaaagggatctaagactccggaatcaaagggatttgttctgaattct
ttctttgatggattgacatctcccgagttctttttccacgcagtgagtggaagagagggg
cttgtcgatactgctgtcaaaacggctgaaacaggatatatgcaaagacgtctaatgaaa
gcacttgaagatttaagcattcagtatgatggtagtgttaggaattcgaatatggaggtg
gtgcagttcgcatatggagaagaccaaatagaccctgtgatgtctgagggggatgaccct
tttaacctcgaaagggtatttctgcagtccaagtctaagttcctgcggaatctcgattta
agccagaccccatatcctttcgaactaaaggaacaggatgttgttgataatctcaggaag
tcgatacctaagggatatcctgttaagcgtatagttaacaaaagatttatacaaagcctc
cttgaatttattgaatcgaagcgtgaagatagattcctccttgatgggactttttattcc
tacttttcatgcgacggttttgcaaagatatttttctcgacgatatctcaaaagatgatg
gacttaataattgaacctgggacaactgttggagcaatagctgggcagagcattggagag
ccaggaactcagatgacacttaagacattccattttgctggggttgctagcatgaacata
actcttggagtcccacgattgaaagagataatcaatgctgtttgtaatattagcacacct
attataaatgcagaactggacgatccatataacttgtttcgggcggaggttataaagggt
cggattgataagatctctctgaaggacgtttgctgcttgataacggaagtcattggaaag
gatgagatcttcctggatgtaaccatagatctagaaacgctctcccgcctgaagttaaat
ctagatatacacaaaattgagaaatctttaaatcttcctgaccaaacaaaggtcactagc
gagaattccataagggtgtatgtcaagaagattgacgatcagagctactttaatctccaa
aaagtcaagaagaagctgttgggcacaagaatatgtggtgcaccgcaggttagtcgggtg
attataaatagcaacagaggacactatagtcttgtcattgaggggcatgggctattgaat
gtcataaatacagacggagtaaagagtagcacaacgactagcaacagcgtaacggaagta
gaggaagtattaggaattgaagcggcaagagctcagataatccatgagattgaatatacc
ataagtaaccatggaatcaagatagatccaaggcacataatgcttctggcagatacgatg
acatatcggggagaggtttttggaataacgagattcggaatttcaaagatgtcaagatct
actcttatgctagcatcctttgagcagacaagcgactatctgtttgaagcggctgtccaa
agtaaatctgacgagatatgtggagtcagtgagtctataattcttgggattcctatttgc
atcggaactggatctatggatttgtactggaacagcaaggcctag
DBGET
integrated database retrieval system
