Encephalitozoon hellem: EHEL_080810
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Entry
EHEL_080810 CDS
T02287
Name
(RefSeq) mRNA deadenylase subunit
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHEL_080810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehe03019
]
EHEL_080810
Messenger RNA biogenesis [BR:
ehe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EHEL_080810
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
EHEL_080810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
13468101
NCBI-ProteinID:
XP_003887764
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All DBs
Position
VIII:82045..82830
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AA seq
261 aa
AA seq
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MSEGQILNVWKDNLHGEMKKISQLINRYNYISMDTEFPGVVAKPIGSFKSPSSFAYQQLR
CNVDILNIIQLGISLSDGQGNRPCPINTWQFNFAFSLETDMYAQESIDLLIQARIDFKEH
ERRGIKVEEFGEVLMTSGLVMSPDVVWVSFHSAYDFGYLIKILTCNPLPEREEDFYRFLA
ALFPDFYDIKFLVQNSKYLKKGLQEISNDLGLVRDGIQHQAGSDALLTSHAFFKTREVLF
NKSIGKEFMCKLFGIEVKDTP
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaggccagatacttaatgtatggaaggacaatctccacggggagatgaagaag
atatcccagctaataaataggtataactacataagcatggataccgagtttcctggtgtt
gttgccaagccgattggaagtttcaagtcgccctcctcgtttgcataccaacaactaaga
tgcaatgtggacatactgaacattatccagctagggatatctctgagcgatggccagggc
aacaggccgtgccccataaacacatggcagttcaactttgcatttagccttgaaacggac
atgtatgcacaggagtcgattgatcttctcattcaagcaagaatagactttaaggagcac
gagaggaggggaatcaaggtggaggagtttggagaagtgctgatgacgtctgggcttgtg
atgtctccggatgtcgtgtgggtctctttccactctgcttatgactttggatacctcata
aagatcctgacatgcaaccctcttccggaaagagaagaggacttctacagattccttgca
gccctgtttccggacttctacgacataaagtttcttgtgcagaacagcaagtatttgaag
aaggggctgcaagagatatccaacgaccttgggcttgtccgggacgggatccagcaccag
gcaggcagtgatgcgctcctgacatcgcatgcgttcttcaaaactagagaggtccttttc
aacaaaagcataggaaaggagtttatgtgtaagttgttcggtattgaggtcaaggacacc
ccctaa
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