Encephalitozoon hellem: EHEL_090410
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Entry
EHEL_090410 CDS
T02287
Name
(RefSeq) superfamily II DNA/RNA helicase
KO
K10841
DNA excision repair protein ERCC-6
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EHEL_090410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ehe03036
]
EHEL_090410
03400 DNA repair and recombination proteins [BR:
ehe03400
]
EHEL_090410
Chromosome and associated proteins [BR:
ehe03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
EHEL_090410
DNA repair and recombination proteins [BR:
ehe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
EHEL_090410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DUF7366
ERCC3_RAD25_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
13466955
NCBI-ProteinID:
XP_003887917
LinkDB
All DBs
Position
IXa:complement(51056..53119)
Genome browser
AA seq
687 aa
AA seq
DB search
MDCRAEDYEKSFVEKYLERTAAERIDDLLEKIEMYKGKGDMERVRKLEGEIEEIRRGLAE
DKSVILKAEDRKEDAGGKESIDFEWSGSDDDERVDVFNLRCEKAIQRYCGFMGIGRGEFE
EHLKKESKIRQGFSVPGFLWDTLFEYQKDGVEWMLKLYKEEKGGVLADDMGLGKTVQMIV
FLSVLFQSGYISRVLILCPATIVSQWILEWKRFYPFVRVYFGFSERSGEGVYLMSYERFK
AREKGLVWDILILDEGHKIKNRNAQITLSVKKVRARSKFVLSGTPIQNNLGELWSIFDFV
NPGLLGSHTSFHEEFEEVIRRGGYRSASNLQVERAYKHSLMLRSLIEPYILRRTKSQISH
KLPSKEDKIVFCTLTPVQVELYNRVLESKHVMKVLTGKANLLSGISMLRKVCNHPRLFFP
GKVDGPEDCSSETCNEKNDGKAEISLEGEERYGLVSSSCKIKILMDLLKKWKEEGSKVLV
FSQTIRMLDIIEMCIRKYTYLRMDGRTATSVRSSLVDRFNRDEDVFIFLLTTKVGGLGLN
LIGASRIVIYDPDWNPSTDTQAKERAWRYGQRKDVEIYRFVCKDTIEEKVYQKQIFKDLL
GKKVLSNPRLNRFFNKSCINELFSFTMTSGADEVRMHESHKCELEDGALKEVRDGDAEVF
SRMKSLNEKKVLSGSEVLEYIRLRESG
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggactgtagggcagaggactatgagaagtcatttgttgagaagtacttggaaagaact
gcggcggaaaggattgacgatcttctagaaaagatagagatgtacaaaggcaagggagac
atggagagagtgaggaagcttgagggggagatagaagagattcgccgagggcttgctgag
gacaagtcggttatattgaaagctgaggatagaaaggaggatgctggaggcaaggagtcg
attgactttgaatggtctggatctgatgatgatgaaagagtcgatgtgttcaatttgagg
tgcgagaaagcgatccagaggtactgtggctttatgggaattggaagaggtgagtttgaa
gagcatttgaagaaggaaagcaagatacggcaagggttttctgtccctgggtttctttgg
gacacactttttgaataccagaaggatggggtagagtggatgctgaagctatacaaggag
gagaaaggaggggttcttgccgatgacatgggccttgggaagacggttcaaatgattgtg
ttcctgtcagttcttttccaaagcgggtatatttccagggtgttgatattgtgtcctgcc
accatagtttcacagtggattcttgagtggaagagattctatccgtttgtgagggtgtat
tttggattttctgagaggagtggagaaggagtctatctgatgtcatatgagagattcaaa
gcaagagagaagggtcttgtatgggacatcttaattttagatgagggccacaagatcaag
aacagaaatgcgcagattacgctttctgtgaagaaggtgagggcaaggagtaagtttgtt
ctttctgggacgcccatccagaacaaccttggagagctgtggtctatatttgactttgtc
aatcccgggcttctagggtcgcacacctccttccatgaagagtttgaggaggtgatacgt
aggggaggatacaggagtgctagtaatctccaggttgaaagggcatacaagcatagcttg
atgctgaggtcgctaatagagccgtatatattgagaaggacaaagtcgcaaatatctcac
aagcttccgtcgaaggaggacaagatagtgttctgtacactaacgcctgttcaggttgag
ctttacaacagggttcttgaatctaagcatgtgatgaaggttctgacggggaaagcaaac
ctgctgagtgggatttcgatgcttcggaaggtatgcaatcatccaaggctattctttcca
gggaaggtagatggccctgaggactgttcctctgagacgtgtaatgaaaagaatgatgga
aaggccgagatttctttagaaggggaggagagatatgggcttgtgagctcttcatgcaag
atcaagattctgatggatcttcttaagaagtggaaagaggagggaagcaaggtgcttgta
ttttcgcaaacaataaggatgctagacataatagagatgtgtatcaggaagtatacgtat
ctgaggatggatggaaggacggcgacctctgttagatcttcgcttgtggatagattcaac
agagacgaagatgtatttatatttcttttgacgaccaaggtaggagggcttgggctgaat
cttattggagcgtctaggatagttatatatgatcctgactggaatccatcgacagacacg
caggccaaggagagggcctggaggtatggacagagaaaggatgtggagatatataggttt
gtttgtaaggacacgattgaagagaaggtttaccagaagcagatatttaaggatctgctt
gggaagaaggttttgagcaatccaaggctgaacaggttcttcaacaagtcgtgcataaat
gagctgttcagctttacgatgaccagcggggctgatgaggttaggatgcatgaatcgcac
aagtgtgagcttgaggatggggctttgaaggaggtccgagatggagatgcagaggtattt
tccaggatgaagagcttgaacgagaagaaggttctgagcggctctgaggtacttgagtat
ataaggctgagggagagcgggtag
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