Encephalitozoon hellem: EHEL_091840
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Entry
EHEL_091840 CDS
T02287
Name
(RefSeq) small nuclear ribonucleoprotein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03018
RNA degradation
ehe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EHEL_091840
09123 Folding, sorting and degradation
03018 RNA degradation
EHEL_091840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehe03019
]
EHEL_091840
03041 Spliceosome [BR:
ehe03041
]
EHEL_091840
Messenger RNA biogenesis [BR:
ehe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
EHEL_091840
mRNA degradation factors
5'-3' decay
Lsm complex
EHEL_091840
Spliceosome [BR:
ehe03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
EHEL_091840
Complex C
U2 snRNP components
EHEL_091840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
13467098
NCBI-ProteinID:
XP_003888058
LinkDB
All DBs
Position
IXb:37008..37292
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AA seq
94 aa
AA seq
DB search
MLFYEFFRSNIGKRIFVMLKAGVYVSGVLSNIDPYLNLSLLEVNILSNHPGLDSISVCSI
RGSSIKYVLVDKDSTLLQGVNAGSRLRMILDKCY
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgttgttttatgagtttttcagatccaacataggaaaacgaatcttcgtgatgctgaag
gctggagtatatgtatctggggtactgagcaacatagatccatacctcaatctaagcctt
ttggaagtgaacatacttagcaatcatcctgggctggatagtatttctgtgtgttctata
cggggctcgtcgataaaatatgtccttgttgataaggactctactctgctgcagggagtg
aatgctgggagtagactcagaatgatacttgataaatgttactga
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