Encephalitozoon hellem: EHEL_100600
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Entry
EHEL_100600 CDS
T02287
Name
(RefSeq) replication factor A protein 1
KO
K07466
replication factor A1
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03030
DNA replication
ehe03420
Nucleotide excision repair
ehe03430
Mismatch repair
ehe03440
Homologous recombination
ehe03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHEL_100600
03420 Nucleotide excision repair
EHEL_100600
03430 Mismatch repair
EHEL_100600
03440 Homologous recombination
EHEL_100600
03460 Fanconi anemia pathway
EHEL_100600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ehe03000
]
EHEL_100600
03032 DNA replication proteins [BR:
ehe03032
]
EHEL_100600
03400 DNA repair and recombination proteins [BR:
ehe03400
]
EHEL_100600
Transcription factors [BR:
ehe03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EHEL_100600
DNA replication proteins [BR:
ehe03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EHEL_100600
DNA repair and recombination proteins [BR:
ehe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EHEL_100600
MMR (mismatch excision repair)
EHEL_100600
DSBR (double strand breaks repair)
HR (homologous recombination)
EHEL_100600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
Rep-A_N
POT1
CDC24_OB3
tRNA_anti_2
UvrC_RNaseH
OB_POT1A
DUF223
OB_MEIOB_N
Motif
Other DBs
NCBI-GeneID:
13466589
NCBI-ProteinID:
XP_003888134
LinkDB
All DBs
Position
X:62540..64258
Genome browser
AA seq
572 aa
AA seq
DB search
MKLEPGTVEALYNSQTSNPLYKSPILQITSLGKLSVAIGDKQRYRVNLSDGVNYMKGIFS
SELTPHFEKGLVSKYSLIRPGRFSVRSKDGSVYIYIQEIQEYEDCNVEIGKPVNISTGNA
SFSDNQPSPGNLKRVEVNQQHWKQADEEDKKRVKRDSNCDGEFTAINMLNPFHNKWVIKG
RVVVKGDIRRFTNQKGEGKVFNFELSDGTAQVKIICFSDCVDIFFPIVEVGKVYTVTKGT
VKMANKQYSTNPFDYEIILDKNSEVRCAADDGSPRYFFNFTKISDISLGSAYCDVIGVVK
EAYGPSTVMVRSTQNELLKRDVVLVDESGSVRLTLWGQKAEIDIEEGVVIGLKSIKVSEF
NGISISTTGGSQVVVNPDISEAHELAGWYQSIGKNMQVTLPRKEEKRRLVQEVKENELAY
STIQGTVMFLKEDALWYASCKGEGCNKKVMIEEGGNYRCERCNMTYEDCNYRYMVTMHLG
DFTGQIWVSLFDEAATGFFGISAKEMKEMSEESPAELQALIRRMCFRECLFRIKSKQDNY
NDELRMRYSGLSVSALDILKESKRLLDVIEKA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgagccgggaacagtcgaagctctttacaacagccagaccagcaatccgctg
tacaagagtccaatcctccagatcacatctctaggaaagttatctgtcgctattggagat
aagcaaagatatcgagtcaatctgtctgacggtgtgaactacatgaaggggattttctcc
agtgagctcacacctcactttgagaaggggcttgtgagtaaatatagcctgatcaggcct
ggaagattcagcgtaaggtcaaaagacggcagtgtatacatatacatccaggagattcag
gagtatgaggactgtaatgtcgagataggaaagcccgtaaacataagcaccggcaatgcg
tctttcagcgacaaccaacccagccccgggaatctaaaacgagtagaagtaaatcagcag
cattggaagcaggctgatgaggaagataaaaaaagagtaaagagggattccaattgcgat
ggggaatttacagcaataaacatgctgaatccgttccacaacaagtgggttataaaggga
agggtagtggtgaagggcgatataagaagattcactaaccagaaaggcgaaggaaaagta
ttcaactttgagctttcagatgggactgcgcaagtgaagataatatgcttttctgattgt
gttgatatattttttccgatagtggaggttgggaaagtgtacactgtcacaaaggggaca
gtaaagatggcaaacaagcagtactccacaaacccgtttgattatgaaataattttggac
aagaattctgaggttaggtgtgcagccgatgatggatcgcctcgatactttttcaatttt
actaaaatctctgatatatcgcttggaagtgcctactgcgatgtaattggagttgttaag
gaagcatatggcccttcgaccgtgatggtcagaagcacgcaaaacgagcttcttaagaga
gatgttgttcttgttgatgaaagcgggagtgtaagattaaccctgtgggggcagaaggct
gagatcgatatcgaggagggggtagttattgggctgaagtctatcaaggtcagcgaattt
aatgggatctcgatatcaaccacaggagggtcgcaggttgtggtaaatcccgatatttct
gaagcacacgagcttgctggatggtatcagtcgattggaaagaacatgcaggtgactctc
ccgcgaaaagaagaaaaaaggaggctagtacaggaagtcaaggaaaatgagctggcctat
tcgaccatccaagggactgtaatgttcttaaaggaagatgctctatggtatgcgtcatgc
aaaggcgagggatgcaataagaaggtcatgatagaggagggtggaaactacaggtgcgag
agatgcaacatgacatacgaggattgtaactacaggtacatggtcacaatgcatcttgga
gactttactgggcagatatgggtgagtctctttgacgaggctgcaacgggattcttcgga
atatctgctaaggagatgaaagagatgagcgaggagtctcctgctgagctacaggcacta
attaggaggatgtgcttcagagaatgtttgttcagaatcaagtcgaagcaggataactat
aacgatgagcttagaatgaggtacagtggattgagcgtgagtgccttggatattttgaag
gagtcaaagaggcttctcgatgtgattgagaaggcatag
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