Encephalitozoon hellem: EHEL_100910
Help
Entry
EHEL_100910 CDS
T02287
Name
(RefSeq) putative RNA-processing beta-lactamase-fold exonuclease
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EHEL_100910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehe03021
]
EHEL_100910
03019 Messenger RNA biogenesis [BR:
ehe03019
]
EHEL_100910
Transcription machinery [BR:
ehe03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EHEL_100910
Messenger RNA biogenesis [BR:
ehe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EHEL_100910
U7-dependent histone pre-mRNA processing factors
EHEL_100910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-Casp
Lactamase_B_6
Lactamase_B
Lactamase_B_2
RMMBL
CPSF73-100_C
Beta_lactamase3
Anti-Pycsar_Apyc1
Lactamase_B_3
Motif
Other DBs
NCBI-GeneID:
13466620
NCBI-ProteinID:
XP_003888165
LinkDB
All DBs
Position
X:complement(111771..113702)
Genome browser
AA seq
643 aa
AA seq
DB search
MFSNEKIKIMPLGAGNEVGRSCVIVECGGRTIMLDCGVHPAYTGVASLPFLDLVDLSKID
AIFITHFHLDHAAALPFLTEKTSFKGKVYMTHPTKAILKWLLNDYIRLINAASDADFYTE
TDLVKCYDRIIPIDYHQEVNVKGIKVKALNAGHVLGAAMFLIEIEKSKVLYTGDFSREED
RHLKAAESPGCKIDALITESTYGVQCHLPRAEREGRFTSIVQNVVQRGGRCLLPVFALGR
AQELLLILEEHWGSNASLQKIPIYYASALAKRCMGVYQTYIGMMNERIQKLSLVRNPFAF
KYVKNLKGIDSFDDEGPCVIMASPGMLQSGLSRDLFERWCSDSRNAVIIPGYCVDGTLAK
EILSEPKEIEALNGKKLRLNMSVEYISFSAHVDFTQNSQFIEECQPKHLFFVHGEMNEMQ
RLRNVIQQRNEKKGVEMVLYTLRNGEEAEFDLVKDNEAKIFTNVEGEFEGIIIGTEDDIR
IYKRDELVEAKYKEMCIYERQRIPYNSTAMLLKQVLMDGFSELVEVDSGFMIGNVHVRLD
GQEVVLEWKSNYADDVLAISISRMISGIGLKTKSVKLSKMGKDELLISVLKNYFVIEKDE
GVIRVKNGCREACISAEGATGDSSIVDRINECMRKIEVIYSEV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaatgagaagataaagataatgcctcttggggcaggaaatgaagttggaagg
tcgtgtgttattgttgaatgcgggggtaggactataatgctggactgcggggtacatcct
gcatataccggggtggcatctcttccctttttggatcttgtggacctctcgaagatcgat
gctatatttatcacacacttccatctcgaccatgctgctgctctaccatttctaacagaa
aaaacaagcttcaaaggaaaggtctatatgacacatcctacaaaggccattcttaaatgg
cttctgaacgattacatcaggcttataaatgcagcatcggatgcagacttctacacggaa
accgatctggtcaagtgttacgatagaatcataccgattgattaccatcaagaggttaat
gtgaaagggattaaagtcaaggcgctgaatgcagggcatgtactgggggcagcaatgttt
ctgattgaaatagagaaaagcaaggttctttacacaggagacttcagcagagaagaggac
aggcacctcaaagcggccgagtcacctggatgcaaaatagacgcactgataacagaatcc
acatacggagtgcaatgccaccttccaagggctgaaagagaaggaaggtttacaagtatt
gtccagaatgttgttcagaggggtggaaggtgcctgcttcctgtgtttgcccttggaaga
gcacaggagctgcttcttattcttgaagagcattggggctcgaatgcttcgttgcagaag
attcccatctactatgcatctgcactggcaaagaggtgtatgggggtataccagacatac
atagggatgatgaacgagagaatccagaagctgagccttgtcaggaatccttttgcgttt
aagtatgtcaagaatcttaagggcatagactcgtttgacgacgaggggccatgtgtgata
atggctagtcctgggatgcttcaaagtgggctttcaagggatctttttgagcggtggtgc
tctgacagcaggaatgcggtgataatacctggctattgtgtggatggaacacttgcaaag
gaaatactcagcgagccgaaggagatagaggcgctgaatggaaagaagcttcggctcaat
atgtctgtagaatatatctcgttcagtgcacatgtggacttcacgcagaacagccagttt
attgaggagtgccagccgaagcatctcttttttgtgcatggagagatgaatgagatgcaa
aggcttaggaatgttattcagcaaagaaatgagaagaagggggttgagatggtgctttat
accctccggaatggggaggaggcggagtttgatcttgtcaaggacaatgaggcgaagata
tttaccaatgttgaaggagagtttgaggggattatcatagggacggaggacgacataagg
atttacaagagagatgagctggttgaggccaaatacaaggagatgtgcatatatgaaagg
caaaggataccgtacaattccacggcgatgctgctgaagcaagttcttatggatgggttt
tctgaacttgtcgaggttgattctgggtttatgataggtaatgtccatgttaggctggat
ggacaagaggttgtgcttgaatggaagagcaactatgcagacgatgtcctggcgatatcg
ataagcaggatgatatctgggattgggttgaagacaaagagtgttaagctgagcaagatg
ggaaaggatgagcttttgattagtgttctaaagaattactttgtgattgagaaggatgag
ggtgttataagagttaagaacgggtgcagagaggcatgtattagtgctgaaggagcgaca
ggcgactcttctatagtcgacagaataaatgaatgcatgcgaaagatagaggtgatatat
tcggaagtctaa
DBGET
integrated database retrieval system
