Encephalitozoon hellem: EHEL_101360
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Entry
EHEL_101360 CDS
T02287
Name
(RefSeq) Rrp4-like RNA-binding protein
KO
K03679
exosome complex component RRP4
Organism
ehe
Encephalitozoon hellem
Pathway
ehe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHEL_101360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehe03019
]
EHEL_101360
Messenger RNA biogenesis [BR:
ehe03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
EHEL_101360
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
EHEL_101360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
13466665
NCBI-ProteinID:
XP_003888209
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All DBs
Position
X:complement(173831..174508)
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AA seq
225 aa
AA seq
DB search
MKALLLPGEDVLESNGYIRGHGTQLKDDHIVSTYFGRVRITNKLVAIDPVSPMKYSPEVG
NVVIGRVVGIHNKKWKMELNSKADVYLGLSAINLPGVAQRRKQESDEMSMRDFFDINDLV
VSEVQKVNRNGTAALHTRNDRYGKLGEGLLVFVPHFLLEPLKTRFLSNGSIRAIVGCNGY
IWIGRKHEDPSTFVEAARVASRVREMAFQNRYINMERLLEKELQN
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccttgcttctgcccggggaggatgtcctggaaagcaatggatacataagaggc
cacggaacacagctcaaggacgatcacatagtatcaacgtactttgggagggtaaggatt
accaacaagcttgtggcaatagaccctgtgtctccgatgaagtacagcccggaggttggg
aatgttgttataggcagagttgttggtatccacaacaagaagtggaagatggaactaaac
agcaaagcagatgtttatcttgggctgtctgccatcaacctgcccggcgtggctcaacgc
cgcaagcaggaatctgacgagatgtccatgagagacttcttcgatatcaatgatcttgtg
gtgtctgaggtccagaaggtcaacagaaatggcactgcagcattgcacacaagaaatgac
agatatggaaagctgggcgaggggcttttagtatttgttccccacttcctacttgagccg
ctcaaaactaggtttctctccaatggcagcatcagggctattgttggatgcaacggatac
atatggatagggaggaaacacgaagacccctctacatttgtggaggcagccagggttgct
tccagagtaagagagatggcattccaaaatagatatatcaatatggagaggttacttgaa
aaggaattgcagaattaa
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