Ehrlichia japonica: EHF_0256
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Entry
EHF_0256 CDS
T03078
Name
(GenBank) 3'-5' exonuclease family protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ehh
Ehrlichia japonica
Brite
KEGG Orthology (KO) [BR:
ehh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehh03016
]
EHF_0256
Enzymes [BR:
ehh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EHF_0256
Transfer RNA biogenesis [BR:
ehh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EHF_0256
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Ofd1_CTDD
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHX04688
UniProt:
X5GJQ7
LinkDB
All DBs
Position
272150..273313
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AA seq
387 aa
AA seq
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MLIDDVKELERICNRLLVLQPEFIAVDTEFIRSSSEYYPRLCSVQIAYAKEHFVIDVLAN
GMDLSALGDIFYNKNIIKVFHDCRQDVDALLTKFPKIPSPIFDTQIAAMFCYCYDNSVGY
SKLVEQFLGISLDKLSFKRSNWELRPLSADKIQYALNDVIYLYELYKMLYNNLVDAGRLL
WFLEEMDNIVSQEANYSNICDIPDFTSDITKEEVIVVKSVIEWREKLAQFFNLNREFILK
NKMVLYLVRDFIKKSDITTLSKYIKKEYLSYDTVSDLFKVIDSNHSVDVNSLCGVNVNNY
NQSVLNILLILLYNICYKSNISQKLVASKGSLVRFLNGKFSHIMKGWRYEFFGCEVEKFM
QGKSKIIVSAQVLDNNYMDIVTTLTEM
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgttaattgatgatgttaaagaattagaacgtatatgtaatcggttacttgtgttacag
cctgaatttattgcagttgatactgaatttataagaagtagtagtgaatattatcctaga
ttgtgttcagtacaaattgcatatgctaaagaacattttgttattgatgttttagcaaat
ggcatggatttatcggctttaggagatattttttataataaaaatataataaaagttttt
catgattgtagacaagatgtggatgcattgttaacaaaatttccaaaaattcctagccct
atatttgatactcaaattgctgctatgttttgttattgttatgataattcagttggatat
tctaagttggtagagcaatttttaggtatttcattagataaactgagttttaaaagatct
aactgggagcttcgtccactatctgctgataaaattcaatatgcactgaacgatgttata
tatttatatgaactttataaaatgttgtataacaatttagtagatgctgggaggctattg
tggtttttggaagaaatggataatatagtgtcgcaggaggctaattatagtaatatttgt
gatattccggattttacttctgatattacaaaagaggaagttattgttgttaaatctgtt
attgaatggcgagaaaaattagctcagttttttaatttaaaccgtgaatttatattaaag
aacaaaatggtgctgtatttagttagagattttataaaaaaaagtgatattaccacttta
agtaaatacataaagaaggaatatttatcatatgatacagtatctgatctttttaaagtt
attgatagtaatcattctgttgatgttaatagtttatgtggtgtaaatgttaataattat
aatcaatctgttttaaatatactgctcatattattgtataatatatgctataaaagcaat
atctcacaaaagttggttgcttctaaaggcagtctagttagatttcttaatggtaaattt
agtcatatcatgaaaggttggaggtatgaattttttggatgcgaagttgaaaaatttatg
caaggtaaatctaaaattatagtttcagcgcaagtgttagataataattatatggacatt
gtgactactttgacagaaatgtag
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