Ehrlichia japonica: EHF_0379
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Entry
EHF_0379 CDS
T03078
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ehh
Ehrlichia japonica
Pathway
ehh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ehh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EHF_0379 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehh03021
]
EHF_0379 (rpoA)
03400 DNA repair and recombination proteins [BR:
ehh03400
]
EHF_0379 (rpoA)
Enzymes [BR:
ehh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EHF_0379 (rpoA)
Transcription machinery [BR:
ehh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EHF_0379 (rpoA)
DNA repair and recombination proteins [BR:
ehh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EHF_0379 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
AHX04608
UniProt:
X5GJJ5
LinkDB
All DBs
Position
400173..401291
Genome browser
AA seq
372 aa
AA seq
DB search
MIFDEDSNSIAQDSGYMAVGNAYSNGVSYISMSDHWSKLTKPSSIKVVPNGTSPNKADLI
IEPLESGFALTLGNALRRVMVSSLRGFAVYGVEIENVLHEFTSISGVREDVTDILLNISM
MRVKLSGMNSKVLSLKVKGPCEVRSGMIADTDDCMILNKDLLICTLDQGVDFNIKMYVNA
GKGYVPAVKRRSISKLGDIPVNFIATNALYSPIKKASFKVESSRIGQFTDYDKLIMSVET
DGSILPDEAVALAARILQDQFQPFINFDETDEPHKKVDTKDTLPYDSNLLRKVDELELSV
RSYNCLKNDNITYIGDLVQKTESDMLRTPNFGRKSLNEINELLASMNLHLGMKIANWPPE
SIESLSKQYSEE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
gtgatttttgatgaggattctaattctattgctcaagactcgggttatatggcggtaggt
aatgcgtactctaatggagtgagttatatatcaatgagtgatcattggagtaagttgact
aagccttcttctattaaggtggttcctaatggtacttctccgaacaaggcagatttaatt
attgaacctcttgagagtggttttgctttaactttaggtaatgctttaagaagagtcatg
gtgtcctctttacgtggctttgctgtttatggggttgagatagaaaatgttttgcacgaa
tttacttcgatttctggagttagggaagatgtaacagatattcttttgaatattagcatg
atgagagtaaaactttctggtatgaatagtaaggttttatctcttaaagtaaagggacca
tgtgaggtaaggtctgggatgatagctgatactgatgattgtatgatactgaataaagat
ttattaatttgcactttagatcagggtgtagattttaatataaagatgtatgttaatgct
ggaaaaggttatgttccagctgtgaagcgtagatcaattagtaagcttggtgatatacca
gtaaatttcattgctactaatgctctctatagtcctataaaaaaggcatcttttaaagta
gaaagtagccgtattggccaatttacagattatgataaattaattatgtctgtggagaca
gatggatctattttgcctgatgaagcagtggcattagctgcaagaattttacaagatcaa
tttcaaccgtttattaattttgatgaaactgatgagcctcataagaaagttgatactaaa
gatacattaccttatgattctaatttattgcgtaaagttgatgaattagaactttcagta
agatcttataattgtttgaaaaatgataatattacttatataggagatttggttcaaaaa
actgaatctgatatgttgagaactccaaattttggtagaaagtcgcttaatgagattaat
gagcttttagcaagtatgaatttgcatttaggaatgaagattgcgaattggcctcctgaa
tccattgagagtttaagtaaacaatatagtgaagaatga
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