Ehrlichia japonica: EHF_0840
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Entry
EHF_0840 CDS
T03078
Name
(GenBank) metallo-beta-lactamase superfamily protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
ehh
Ehrlichia japonica
Pathway
ehh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF_0840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehh03019
]
EHF_0840
Messenger RNA biogenesis [BR:
ehh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EHF_0840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
RNase_J_C
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
AHX04883
UniProt:
X5GKA1
LinkDB
All DBs
Position
971692..973314
Genome browser
AA seq
540 aa
AA seq
DB search
MNTDDLLFVPLGGVGQIGMNVNLYHLNGKWIIIDFGAGFADDNMPGIDMIVADISFIKKN
KKNLLGIVLTHAHEDHIGGIQYLWNDLQCPIYATKFTAALLQAKLKEYSFEVNITEIDTT
KRLNLGPFTLEFINLTHSIPEMNAIALHTDKGIVVHTGDWKLDDNPMIGPVSNTQRLKEL
GDEGVLALVCDSTNIFTKNKSGSEGDLEESLFNIIKNCNQKVAVSLFASNIARIHTITHI
AERLDRKVVILGKSLIRITQAAQDSGYLQDIPEFININQANKLPRNQVLLLCTGCQGEAL
AATAKLANNSHALTKLEDGDTIIFSSKIIPGNEKRIYSVFNKFVNMGINVITEFMEHVHV
SGHPSKNEVATMYSLVRPKLSIPVHGEYIHMYEHAKIAKQCNVDKAIIVHPGDVISLTKK
QKINSVKAGYFGVDGNFLHHPQGSVISMRKRMKDSGIIVITLVLNNKKELLKEPRIFAPG
VLDHFDSGAIIKKISSKISSELYSKKINNIRQHVENIVFNALKHNVKNKPFVEVQLEYIN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgatgatttattgtttgtacccttaggtggggtcggacagataggcatgaat
gtcaatttatatcatttgaatggtaaatggataatcattgatttcggagcaggttttgct
gatgacaatatgccaggaatagacatgattgttgctgatatcagctttataaaaaaaaat
aaaaagaatctacttggtatagtattaacacatgctcatgaagaccatataggaggtata
cagtatctctggaatgatttacaatgtccaatatatgcaacgaaatttaccgctgcttta
ctgcaagcaaaattaaaagaatattcatttgaagtcaacataacagaaattgatactaca
aaaagattaaatcttggtccttttactcttgaatttataaatttgacacactcgatacca
gaaatgaatgcaattgcattacatactgacaaaggaatagtagtacacacaggagattgg
aagttagatgataacccaatgattggccctgtatcgaacacacaaaggttaaaagaatta
ggagatgaaggagttttagcacttgtatgcgattcaaccaacatatttactaaaaacaaa
tcaggatccgaaggtgacttagaagaaagtttgttcaatataataaaaaactgcaatcaa
aaagttgccgtatctttatttgcttccaacattgcacgaatccataccataacacacatt
gcagaaagattagatagaaaagtagtaatactaggaaaatctcttataagaattacacag
gctgcacaagacagcgggtatctacaagacataccagaattcattaacatcaaccaagca
aataaacttccaaggaatcaagttttactactttgtactggttgtcaaggtgaagcgtta
gcagcaactgctaaacttgctaacaattctcatgcattaaccaaattagaagatggagat
acaatcatcttttcttccaaaataattccaggaaatgaaaagcgcatatatagtgtattc
aataaattcgtcaatatgggaattaatgttattacagaatttatggaacatgtacatgta
tcaggacacccttccaaaaatgaagtagctactatgtattcattagtaaggcctaaacta
tctattcctgtgcacggggaatacatacatatgtacgaacatgccaaaattgcaaagcag
tgtaacgtagataaagcaataatagttcatccaggagatgtaataagcctcacaaaaaaa
caaaagattaattctgtgaaagctggttattttggtgttgatggtaatttcttacaccac
cctcaaggtagcgtcatatccatgaggaaaaggatgaaagattcaggaataattgtaata
acactagttttaaataataaaaaagaactattaaaagagccaagaatttttgctccaggg
gtgttagaccattttgatagtggagcaattatcaaaaaaatctcatctaaaataagcagt
gaactttattctaaaaaaataaacaatatacgacaacatgtggaaaatatagtttttaat
gctttaaaacacaatgttaaaaacaaaccattcgttgaagtacagctagaatacataaac
tag
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