Entamoeba histolytica: EHI_033130
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Entry
EHI_033130 CDS
T00238
Symbol
193.t00008
Name
(RefSeq) cleavage and polyadenylation specificity factor 100 kDa subunit
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ehi
Entamoeba histolytica
Pathway
ehi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EHI_033130 (193.t00008)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehi03019
]
EHI_033130 (193.t00008)
Messenger RNA biogenesis [BR:
ehi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EHI_033130 (193.t00008)
U7-dependent histone pre-mRNA processing factors
EHI_033130 (193.t00008)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-Casp
CPSF100_C
DUF6840
Motif
Other DBs
NCBI-GeneID:
3405204
NCBI-ProteinID:
XP_650902
UniProt:
C4M6Y0
LinkDB
All DBs
AA seq
514 aa
AA seq
DB search
MKFNRPMVLLTDIGGLGKCQEMLNNVMMEIRKIVLRKGCCLLPVECGGRIMEYMEMVYIS
CDVDINRVIKDASFYCISSVADQIKEMNKTIMEWVRDGTDITNFKNISFQDNLEKLKRDL
DARKPCVVFATLASFSVGSISRDVLLKICRDKRNGIIFLEPPQKGTVASEIEEFASPMNQ
KTSVKVDVWHTEDYTEEELKEIEALKEQKAKEENENKEHQIEEEKVQEKEIEEIEEIEEE
SEEDKKTMWQIKTDLYEDDLEDVGGLFPFFHNKVETTVYGDISTFKIEMNVEEPLLGNKD
VDEVNEIEDYPRKYVKEEEELIISCTVASYDVSAEMETTKIRSIIARLIPRNLVFVSALE
PNGIEWFKQNLPHSNIYGFNNTEIMTTICPVTPSETFTIDDSLLTVMKLNHFKEFNLGPI
DAKVEDGTLLPITRQQRKRHESVYIGELPIKVLTKAIETENIDVKIVNGTIVCANGTITV
SKEPSDVPKFIVRGRMNKAFFKVRKIVAEQFCIL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttaatagaccaatggtattattaacagatattggaggattagggaaatgtcaa
gaaatgttaaataatgttatgatggaaataagaaaaatagtattaagaaaaggatgttgt
ttacttcctgttgagtgtggaggaagaataatggaatatatggaaatggtttatatttca
tgtgatgttgatattaatagggtaattaaagatgcatcattttattgtatttcaagtgta
gctgatcaaattaaagaaatgaataaaactataatggaatgggttcgtgatgggactgat
attactaattttaaaaacatatcatttcaagataatttagagaaattaaaacgagacctt
gatgcaagaaaaccatgtgttgtttttgctacattagcttccttctctgttggaagtatt
tcaagagatgttttattaaaaatttgtagagataaaagaaatggaattattttccttgaa
ccacctcaaaaaggaactgttgcaagtgaaattgaagaatttgctagtccaatgaatcaa
aaaacaagtgttaaagttgatgtatggcatacagaagattatactgaagaagaattaaaa
gaaattgaagcattaaaagaacaaaaagcaaaagaagaaaatgaaaataaagaacatcaa
attgaagaagaaaaagttcaagaaaaagaaatagaagaaatagaagaaattgaagaagaa
agtgaagaagataaaaaaactatgtggcaaattaaaacagatttatatgaagatgattta
gaagatgtaggtggattatttccattttttcataataaagttgagacaacagtttatgga
gatatttcaacatttaaaattgaaatgaatgttgaagaaccattattaggaaataaagat
gtagatgaagttaatgaaatagaagattatcctcgtaaatatgttaaagaagaagaagaa
ttaattattagttgtactgtagcatcatatgatgttagtgctgaaatggaaacaactaaa
attcgatcaattattgcaagattaattcctaggaatttagtttttgtttcagcattagaa
ccaaatggaatagaatggtttaaacaaaatttacctcatagtaatatttatggatttaat
aatactgaaataatgactactatatgtcctgtaactccttcagaaacatttacaattgat
gatagcttattaactgtcatgaaattaaatcattttaaagaatttaatttaggtccaatt
gatgcaaaagtagaagacggaacattacttcctatcactcgacaacaaagaaaacgtcat
gaatcagtttatattggtgaattaccaattaaagttttaactaaagcaattgaaacagaa
aatattgatgttaaaattgttaatggaaccattgtatgtgcaaatggaacaattacagtt
tcaaaagaaccttcagatgtacctaaatttattgtaagaggaagaatgaataaagctttt
tttaaagttagaaagatagttgctgaacaattttgcattttgtaa
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