KEGG   Entamoeba histolytica: EHI_040300
Entry
EHI_040300        CDS       T00238                                 
Symbol
144.t00004
Name
(RefSeq) WD domain containing protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ehi  Entamoeba histolytica
Pathway
ehi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EHI_040300 (144.t00004)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ehi03041]
    EHI_040300 (144.t00004)
Spliceosome [BR:ehi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    EHI_040300 (144.t00004)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I WDR55 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st PRP4 WD40_RFWD3 NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_Vps41 PEP5_VPS11_N WDR90_beta-prop_4th eIF2A Beta-prop_IFT122_1st WDR54 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_NOL10_N WD40_like WD_LRWD1 Beta-prop_RIG_1st Beta-prop_WDR35_TULP_N Beta-prop_VPS8
Other DBs
NCBI-GeneID: 3406158
NCBI-ProteinID: XP_651845
UniProt: C4M2F9
LinkDB
AA seq 426 aa
MKNIPTTQQHAENIMKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERL
RDALAKVGSDQGFPQCALTEEKTDQLITKLHYTDGGEELIGIRRWLLVDSLLRAKSRTKE
EIHYVQHKYESIHNVGSMIGDEYRVLRCKVGRKSVITGGADGKVRVWDLSDCSKIRETSV
EGQIYSLNFSPIEEAPIDFVVGTSQGYVKLFAKNEEQPLGIQSHTDRVNAVEFHQSGRFL
LTGSHDSMIKLWDLENGGCVLKQTGHSGSVRCIGWQRDGGIFASGGNDRIVHLFDVRNGK
QIGKYEGHASTITSLDWHCNGGVLVTASDDNTVKLWDIRMERCGYTIPAHSTIVTAVKLS
HQGDLLLTSSFDHSIKLWSLKNWNWKLVCKYEEHSKPVVDVDWLEDDEGFISCGFDKTWK
IYKTEE
NT seq 1281 nt   +upstreamnt  +downstreamnt
atgaaaaacattcctactactcaacaacatgcagaaaatattatgaaattagaagaaaaa
tggaaatatagaaaaatcccacttcctacagaagataaaatggttatgttaagattgaga
gaattaggagaaccaattatgttatttggagaagaatttgagagtagaagagagagactg
agagatgcattagctaaagttggttctgaccaaggatttccacaatgtgcacttacagaa
gaaaaaaccgaccaactaataactaaattacattatactgatggtggagaagaattaatt
ggaataagaagatggttgttagttgatagtttacttagagctaagtcaagaacgaaagaa
gaaattcattatgttcaacacaaatatgagtcaatacataatgttggttcaatgattgga
gatgaatatagagttttacgatgtaaagtaggaagaaaaagtgttatcacagggggtgca
gatgggaaagtcagagtatgggatttaagtgattgttcaaaaataagagaaacgagtgtt
gaaggacaaatttattcattaaatttttcacctattgaagaagcaccaattgattttgtt
gtaggaacatcacaagggtatgtcaaattatttgcaaaaaatgaagaacaaccacttggt
attcaaagtcatactgatagagtgaatgcggtagaatttcatcaatcaggaagattttta
ctaacagggtctcatgattcaatgataaaattatgggatttagagaatggaggatgtgta
ttaaaacaaactggacatagtggttctgtaagatgtattggatggcaacgagatggtggg
atatttgcatcaggaggaaatgatcgtattgttcatttatttgatgttcgaaatggtaaa
caaataggaaagtatgaaggacatgcatctacaataactagtctagactggcattgtaat
ggaggagtattagtcacagcatctgatgataatacagtaaaattatgggatattcgaatg
gaaagatgtggatatactattccagcacatagtactattgtcacagccgtaaaattaagt
catcaaggagatttattactaacaagtagttttgaccattccattaaactttggtcatta
aaaaattggaattggaaattggtatgtaaatatgaagaacattcaaagccagttgtagat
gtagattggttagaggatgatgaaggatttatttcgtgtggttttgataaaacatggaaa
atatataagactgaagaatga

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