Entamoeba histolytica: EHI_040300
Help
Entry
EHI_040300 CDS
T00238
Symbol
144.t00004
Name
(RefSeq) WD domain containing protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ehi
Entamoeba histolytica
Pathway
ehi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EHI_040300 (144.t00004)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehi03041
]
EHI_040300 (144.t00004)
Spliceosome [BR:
ehi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EHI_040300 (144.t00004)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
PRP4
WD40_RFWD3
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_Vps41
PEP5_VPS11_N
WDR90_beta-prop_4th
eIF2A
Beta-prop_IFT122_1st
WDR54
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_NOL10_N
WD40_like
WD_LRWD1
Beta-prop_RIG_1st
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
3406158
NCBI-ProteinID:
XP_651845
UniProt:
C4M2F9
LinkDB
All DBs
AA seq
426 aa
AA seq
DB search
MKNIPTTQQHAENIMKLEEKWKYRKIPLPTEDKMVMLRLRELGEPIMLFGEEFESRRERL
RDALAKVGSDQGFPQCALTEEKTDQLITKLHYTDGGEELIGIRRWLLVDSLLRAKSRTKE
EIHYVQHKYESIHNVGSMIGDEYRVLRCKVGRKSVITGGADGKVRVWDLSDCSKIRETSV
EGQIYSLNFSPIEEAPIDFVVGTSQGYVKLFAKNEEQPLGIQSHTDRVNAVEFHQSGRFL
LTGSHDSMIKLWDLENGGCVLKQTGHSGSVRCIGWQRDGGIFASGGNDRIVHLFDVRNGK
QIGKYEGHASTITSLDWHCNGGVLVTASDDNTVKLWDIRMERCGYTIPAHSTIVTAVKLS
HQGDLLLTSSFDHSIKLWSLKNWNWKLVCKYEEHSKPVVDVDWLEDDEGFISCGFDKTWK
IYKTEE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacattcctactactcaacaacatgcagaaaatattatgaaattagaagaaaaa
tggaaatatagaaaaatcccacttcctacagaagataaaatggttatgttaagattgaga
gaattaggagaaccaattatgttatttggagaagaatttgagagtagaagagagagactg
agagatgcattagctaaagttggttctgaccaaggatttccacaatgtgcacttacagaa
gaaaaaaccgaccaactaataactaaattacattatactgatggtggagaagaattaatt
ggaataagaagatggttgttagttgatagtttacttagagctaagtcaagaacgaaagaa
gaaattcattatgttcaacacaaatatgagtcaatacataatgttggttcaatgattgga
gatgaatatagagttttacgatgtaaagtaggaagaaaaagtgttatcacagggggtgca
gatgggaaagtcagagtatgggatttaagtgattgttcaaaaataagagaaacgagtgtt
gaaggacaaatttattcattaaatttttcacctattgaagaagcaccaattgattttgtt
gtaggaacatcacaagggtatgtcaaattatttgcaaaaaatgaagaacaaccacttggt
attcaaagtcatactgatagagtgaatgcggtagaatttcatcaatcaggaagattttta
ctaacagggtctcatgattcaatgataaaattatgggatttagagaatggaggatgtgta
ttaaaacaaactggacatagtggttctgtaagatgtattggatggcaacgagatggtggg
atatttgcatcaggaggaaatgatcgtattgttcatttatttgatgttcgaaatggtaaa
caaataggaaagtatgaaggacatgcatctacaataactagtctagactggcattgtaat
ggaggagtattagtcacagcatctgatgataatacagtaaaattatgggatattcgaatg
gaaagatgtggatatactattccagcacatagtactattgtcacagccgtaaaattaagt
catcaaggagatttattactaacaagtagttttgaccattccattaaactttggtcatta
aaaaattggaattggaaattggtatgtaaatatgaagaacattcaaagccagttgtagat
gtagattggttagaggatgatgaaggatttatttcgtgtggttttgataaaacatggaaa
atatataagactgaagaatga
DBGET
integrated database retrieval system