Entamoeba histolytica: EHI_049170
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Entry
EHI_049170 CDS
T00238
Symbol
902.t00001
Name
(RefSeq) splicing factor 3B subunit 1
KO
K12828
splicing factor 3B subunit 1
Organism
ehi
Entamoeba histolytica
Pathway
ehi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EHI_049170 (902.t00001)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehi03041
]
EHI_049170 (902.t00001)
03036 Chromosome and associated proteins [BR:
ehi03036
]
EHI_049170 (902.t00001)
Spliceosome [BR:
ehi03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
EHI_049170 (902.t00001)
Complex B
EHI_049170 (902.t00001)
Complex C
U2 SnRNP specific factors
EHI_049170 (902.t00001)
Chromosome and associated proteins [BR:
ehi03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
EHI_049170 (902.t00001)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EF3_N
XMAP215_CLASP_TOG
Cnd1
INTS1_R4
Htt_N-HEAT_1
Motif
Other DBs
NCBI-GeneID:
3401891
NCBI-ProteinID:
XP_647865
UniProt:
C4MAD8
LinkDB
All DBs
AA seq
914 aa
AA seq
DB search
MSNSSESESRHRRRSESYSSDYSPRPRRSRWDEKPTVVSTLIDTNEKPDATPALISNDIG
IQNKIESLPDVKPGERAFFEDALIQRDESELSSEERKKIQLKRLLLRIKNGTPAMRKQAL
RQLTERTKEFGAEVLFEQILPLLMSITLEQQERHILVKVVNRIIFKLDSLVRPFTAKLLV
VITPLLDDADFIARVEGREIISNLAKAAGLQTMIAAMRPDIDSPEESIRNTTARAFSVVA
AAIGIPSLLPFLKAVCGSKKSWYARHTGLKCIQQIAILMGCSVLPHLSALVAIVFPRLND
IEANITKFAALAIAALAEASYPYGGDVLEQTLEPIIEGCKRMRGRLLASYIKAAGQVISV
VDEEIAAKYGWEIIRVVVREFKTSDEEMKKIVLKVIRQCLNVEIIGKETSKNNIAERFFE
SFWHRRNSVDKKLSKEVIETALLLSQKMGAKYILEKIVVFLKDENEPFRKMTLKAMEKVI
QQFGIYEIDEDLEKRIFDGLTFAFIEQTSGDENAQALQSISFIMNCFSERVVPYLEAFSE
NIKWRFHNKSPKIRQCAVEILGNICGLYIKCNQKPTLIDLCEILYELLGESNTEVLASTM
ITLKEIISLCNLEEIRPSISDLVPGLTPILRNTNERIEEACIGLIGIIAKKSADTGAEMV
HLKEWMRICHELLDAFKAHKKSIRRATVDTFGDIAKAIGPQEVLIMLLNNLKVLDRQLRV
CTTIAIAVVADSCAPFTVIPSLMNEYRMPDINIKTGVLKAFAFLFEYIGEKSKDYIYPVI
PLLCDALAEKDAVHRQTACTVVKFISLGIYGLGCEDALIHMLNYVWPNIFETSPHVINAT
LEALEGIRVSLGVLVLMQYVLQGLFHPARHVREPYWRVYNNMYIGNQDGLVAAYPVLEDD
EYNMNRRYELEILL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacagtagtgaatctgaaagtcgtcatagaagaagatcagaatcatattcatct
gattattcaccaagaccaagaagatcacgttgggatgaaaaacctactgtagtttcaaca
ttaattgatacaaatgaaaaacctgatgcaacacctgctttaatttcaaatgatattggt
atacaaaataaaattgaatcattaccagatgtaaaaccaggagaacgagcattttttgaa
gatgctttaatacaacgagatgaatcagaattatcaagtgaagaacgaaaaaaaattcaa
cttaaaagattattattaagaattaaaaatggaacacctgcaatgagaaaacaagcatta
cgtcaacttactgaaagaacaaaagaatttggagcagaagtattatttgaacaaatttta
ccattacttatgtcaataactttagaacaacaagaaagacatattttagtaaaagtagta
aatcgtattatttttaaattagatagtttagttcgtccatttactgcaaaattattagtt
gttataacacctttacttgatgatgcagattttattgctcgtgtagaaggaagagaaatt
atatcaaatttggctaaagctgctggtcttcaaacaatgatagcagctatgagaccagat
attgattcacctgaagaatcaattagaaatacaacagctcgtgcattttctgttgttgct
gcagcaattggaataccatcattacttccttttttaaaagctgtttgtggatcaaagaaa
agttggtatgcacgtcatacaggattaaaatgtattcaacaaattgctattttaatggga
tgttctgttcttcctcatttatcagcacttgttgctattgtttttcctagacttaatgat
attgaagctaatataactaaatttgcagcacttgctattgcagcacttgcagaagcatca
tatccatatggtggagatgttttagaacaaacattagaaccaattattgaaggatgtaaa
cgaatgagaggaagattacttgcatcttatattaaagcagcaggacaagtgatatcagtt
gttgatgaagaaatagcagcgaaatatggatgggaaattattagagttgttgtaagagaa
tttaaaacatcagatgaagaaatgaagaaaattgtattaaaagtaataagacaatgttta
aatgttgaaattattggaaaagaaacatcaaaaaataatattgcagaaagattttttgaa
tcattttggcatagaagaaattcagttgataaaaaattaagtaaagaagttattgaaaca
gcattattattatcacaaaaaatgggtgcaaaatatattttagaaaaaattgttgttttt
cttaaagatgaaaatgaaccatttagaaaaatgacattaaaagcaatggaaaaagtaatt
caacaatttggaatatatgaaattgatgaagatttagaaaaaagaatatttgatggatta
acatttgcttttattgaacaaacttctggtgatgaaaatgcacaagcattacaaagtatt
tcatttataatgaattgttttagtgaaagagtagttccttatcttgaagcattttcagaa
aatattaaatggagatttcataataaatcaccaaaaattcgacaatgtgcagttgaaatt
ttagggaatatttgtggattatatattaaatgtaatcaaaaaccaacattaattgatctt
tgtgaaattttatatgaattattaggagagtcaaatacagaagtattggcttctactatg
attactcttaaagaaataatttccttatgtaatttagaagaaataagaccatctattagt
gatcttgtacctggtttaactccaatattaagaaatactaatgaaagaattgaagaagca
tgtattggattaattggaattattgcaaagaaatcagctgatacaggtgctgaaatggtt
catttaaaagaatggatgagaatttgtcatgaattacttgatgcatttaaagcacataaa
aaatcaattagacgtgcaactgttgatacttttggagatattgcaaaagcaattggtcct
caagaagtattaattatgttacttaataatttaaaagtattagatcgtcaattaagagta
tgtactacaattgcaattgcagttgttgcagattcatgtgcaccatttactgttattcca
tcattaatgaatgaatatcgtatgcctgatattaatattaaaactggtgtattaaaagca
tttgcttttttatttgaatatattggagaaaaaagtaaagattatatttatcctgtaatt
cctttattatgtgatgctcttgcagaaaaagatgctgttcatagacaaactgcatgtact
gttgtaaaatttatttcattaggtatttatggattaggttgtgaagatgctttgattcat
atgttaaattatgtttggcctaatatttttgaaacttctcctcatgtaattaacgcaaca
ttagaagctcttgaaggtattagagtatcattaggagttcttgtattaatgcaatatgtt
ttacaaggattatttcatccagctcgtcatgtaagagaaccatattggagagtatataac
aatatgtatattgggaatcaagatggtttagttgctgcatatccagtacttgaagatgat
gaatataatatgaatcgtcgttatgaattagaaatattattatga
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