KEGG   Entamoeba histolytica: EHI_073300
Entry
EHI_073300        CDS       T00238                                 
Symbol
9.t00070
Name
(RefSeq) hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
ehi  Entamoeba histolytica
Pathway
ehi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EHI_073300 (9.t00070)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ehi03019]
    EHI_073300 (9.t00070)
   03041 Spliceosome [BR:ehi03041]
    EHI_073300 (9.t00070)
Messenger RNA biogenesis [BR:ehi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     EHI_073300 (9.t00070)
Spliceosome [BR:ehi03041]
 Complex B
  Other components
   Prp19-related factors
    EHI_073300 (9.t00070)
 Complex C
    EHI_073300 (9.t00070)
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_CNRKL1_N HAT_Syf1_M HAT_PRP39_N HAT_PRP39_C Suf ARM_TT21 TPR_19 DUF6486
Other DBs
NCBI-GeneID: 3410989
NCBI-ProteinID: XP_656694
UniProt: C4LXJ5
LinkDB
AA seq 699 aa
MNEEKNISIYEFDVKQNPQSFKTWWNYIEYFDESHFQSKITIFQRALHELPGSYKLWYHY
LQTILINARKSGIDTEIRKSVNEVFEESLVYMNKMPVIWKLYIEWLIENGEITQMRRVFD
RSLQSLPIGQHNELWKVVMKFVITLNTPLLFEKLVLRHILLDRGMIGEYIQICKKKGEKY
YPLALKLLIQNVSLHSFRMKKEEYDFMIHIFESLTVQDKGIDVQNIMKKGIQEFPEDTGS
LWVGMSLYEIKEGRIETGISILEEAMNEVITLRDLYIVRQCYEQVIHNYINKPGIKEVEK
QVIEERKEYLLGNQNIQMNLVLLKKEPYNVKEWIERSRLYVKNGDVLSGVKTLIEGIKTI
HGGKEINGKKNELWSELIGWYLKGNKRNEAKQLFEKAKEDNLTQREEAEIWYEMIQNKIK
SNNINEARALCEEATLRQSKVKNERMIWKGYLEIEEISHNIMGKWSVYEKMIELKIITGR
ELIEYIKEKKDKGDGDDIWKIYEKGINIFEYPVKGMLYNQYINEWCSLYGEKKKERTRDL
FENAIESAPIEWKKKMYDQYIKYEIKNNSFKRVIDLYKKEVNEILNEEKCEVWIKYAQQV
DEVFGFEETKKVYLEGLNSIGRIDEWKLSLSFAEYLENQEDIEGAREIFSTGSKRCSVKE
HEEYWDRWKEFEERFGSENTFKDYLVTKKTVMKYFGEAE
NT seq 2100 nt   +upstreamnt  +downstreamnt
atgaatgaagaaaagaatatttcaatctatgaatttgatgtaaaacaaaatccacaatca
tttaaaacttggtggaattatattgaatattttgatgaaagtcattttcaatctaaaata
accattttccaacgagcattacatgaattgccaggaagttataaattgtggtatcattac
cttcaaactattcttataaatgcaagaaagagtggaattgatactgaaattagaaagagt
gtaaatgaggtatttgaagaaagtttagtatatatgaataaaatgccagttatatggaaa
ttatatattgaatggttaatagagaatggagaaataacacaaatgagaagagtatttgat
agatcattacaatctttaccaattggtcaacataatgaactttggaaagttgttatgaaa
tttgtgattacattaaacacaccactattatttgagaaattagtattgagacatatttta
ttagatagaggaatgattggagaatatattcaaatttgtaaaaagaaaggagaaaaatat
tacccacttgcattaaaattattaattcaaaatgttagtttacattcatttagaatgaaa
aaagaagaatatgattttatgattcatatttttgaaagtcttactgtccaagataaagga
attgatgttcaaaatataatgaaaaaaggaattcaagaatttcctgaagatactggaagt
ttatgggttggaatgtctttgtatgaaattaaagaagggagaatagaaacaggaatttca
atattagaagaagcaatgaatgaagtgattacactaagagatctttatattgtaagacaa
tgttatgaacaagttatacacaattatataaataaaccaggaataaaagaagtagaaaaa
caagtaatagaagaaagaaaagagtatttacttggaaatcaaaatattcaaatgaattta
gtattacttaagaaagagccatataatgtcaaagaatggattgaaagaagtagactttat
gtaaaaaatggagatgttttaagtggtgttaaaacattaatagaaggaattaaaacaatt
catggaggaaaagaaattaatggaaaaaaaaatgagttatggagtgaacttattggatgg
tatcttaaagggaataaaagaaatgaagcaaaacaattatttgaaaaagcaaaagaagac
aatttaacacaaagagaagaagctgaaatttggtatgaaatgatacaaaataaaattaaa
agtaataatataaatgaagcaagagcattatgtgaagaagcaacattaagacaatcaaaa
gtaaagaatgaaagaatgatttggaaagggtatcttgagattgaagaaatatcacacaat
ataatggggaaatggagtgtttatgaaaaaatgatagaattaaaaattattacagggaga
gaattaatagaatatattaaagaaaaaaaagacaaaggagatggagatgatatatggaaa
atttatgaaaaaggaattaatatttttgaatatccagtaaaagggatgttatataatcaa
tatattaatgagtggtgttcattgtatggagaaaagaaaaaagaaagaacacgtgacctt
tttgaaaatgccattgaaagtgcacctattgaatggaaaaagaagatgtatgatcaatac
attaaatatgaaataaagaataactcatttaaaagagttattgatttatataaaaaagaa
gttaatgaaatacttaatgaagaaaagtgtgaagtatggatcaaatatgctcaacaagta
gatgaagtttttggatttgaagaaacaaaaaaggtatatttagaaggtttaaattcaata
ggaagaatagatgaatggaaattatctctttcatttgctgagtatttagaaaaccaagaa
gatattgaaggtgcaagagaaattttttcaactggaagtaaaagatgtagtgttaaagaa
catgaagaatattgggatagatggaaagaatttgaagaaaggtttggtagtgaaaataca
tttaaagattatttagttacaaagaaaacagttatgaaatattttggagaagcagaatga

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