Entamoeba histolytica: EHI_086540
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Entry
EHI_086540 CDS
T00238
Symbol
180.t00016
Name
(RefSeq) Activator 1 40 kDa subunit
KO
K10755
replication factor C subunit 2/4
Organism
ehi
Entamoeba histolytica
Pathway
ehi03030
DNA replication
ehi03410
Base excision repair
ehi03420
Nucleotide excision repair
ehi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHI_086540 (180.t00016)
03410 Base excision repair
EHI_086540 (180.t00016)
03420 Nucleotide excision repair
EHI_086540 (180.t00016)
03430 Mismatch repair
EHI_086540 (180.t00016)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehi03032
]
EHI_086540 (180.t00016)
03036 Chromosome and associated proteins [BR:
ehi03036
]
EHI_086540 (180.t00016)
03400 DNA repair and recombination proteins [BR:
ehi03400
]
EHI_086540 (180.t00016)
DNA replication proteins [BR:
ehi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EHI_086540 (180.t00016)
DNA Replication Termination Factors
ELG1-RFC complex
EHI_086540 (180.t00016)
Chromosome and associated proteins [BR:
ehi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EHI_086540 (180.t00016)
DNA repair and recombination proteins [BR:
ehi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EHI_086540 (180.t00016)
Check point factors
HRAD17(Rad24)-RFC complex
EHI_086540 (180.t00016)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
AAA_22
AAA_lid_RFC1
Rep_fac_C
RCF1-5-like_lid
Rad17
nSTAND_NTPase5
nSTAND3
AAA_14
RuvB_N
AAA_16
AAA_assoc_2
AAA_7
DUF815
AAA_5
DUF8341
NPHP3_N
Mg_chelatase
Gp44_lid
FtsK_SpoIIIE
KTI12
AAA_19
SRP54
AAA_3
RNA_helicase
NTPase_1
MeaB
Viral_helicase1
AAA_30
Med15_M
UBA_Rad5
ABC_tran
Zeta_toxin
HP_1247_M
NACHT
AAA_33
Motif
Other DBs
NCBI-GeneID:
3405457
NCBI-ProteinID:
XP_651156
UniProt:
C4M8Z1
LinkDB
All DBs
AA seq
315 aa
AA seq
DB search
MSKIQAIPWVEKYRPKLLDEIIGNVDIIKTLKSFRDSKQFPHLLLCGQPGIGKTTSIHCL
AHELLKDRYKDAVLELNASDERGIETIRSTIKSFCEKKLVLPDNLPKIVILDEADSMTTA
AFQALRRTMEIHSKTTRFVLACNTPEKIIEPIQSRCARLTFRPLGEEELMNRIKEIAHCE
GVDIEDDAVKALEIVSEGDMRKAINALQTCAIIQGKITKEQVYQRNDLPSADNIIQAIQL
CLKKDFDGALIEIKKVQQLGFDGNDIIDMIVRMFSKIDASEEIRVRLYEIAAPFLIHRVN
SNVQVYGLMAKICSI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaatacaagcaatcccttgggttgaaaaatatagaccaaaacttcttgatgaa
atcattggtaatgttgatatcattaaaacactaaaaagttttcgtgattctaaacaattt
cctcatttattattatgtggtcaaccaggaattggtaaaacaacttcaattcattgttta
gctcatgaattattaaaagataggtataaagacgctgttctggaactgaatgcttctgat
gaacgtggaatagaaactattcgttctacaataaaatctttttgtgaaaagaaattagta
ttacctgataatttaccaaaaattgttatattagacgaagcagattcaatgacaacagct
gcttttcaagccttacgtaggacaatggaaatacattctaaaacaacacgatttgttctt
gcttgtaatactccagaaaagattattgagcctattcaatcaagatgtgcaagactaaca
tttagaccattaggagaagaagagcttatgaatagaattaaagaaatagctcattgtgaa
ggtgttgacattgaagatgatgctgtcaaagcacttgaaatagtttctgagggtgatatg
cgtaaagcaattaatgcacttcaaacatgtgctatcattcaaggtaaaatcactaaagaa
caagtttatcaacgaaatgatcttccatcagcagataatattattcaagctattcagtta
tgtctcaaaaaagactttgatggagcattaattgaaattaaaaaagttcaacaacttgga
tttgatggaaatgatataatagatatgattgtaagaatgttttctaaaattgatgcaagt
gaagaaataagagtacgactttatgaaatagcagcaccttttcttattcatagagtaaat
tctaatgttcaagtttatggattaatggcaaaaatttgttcaatttaa
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