KEGG   Entamoeba histolytica: EHI_087360
Entry
EHI_087360        CDS       T00238                                 
Symbol
169.t00023
Name
(RefSeq) RNA polymerases II subunit
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
ehi  Entamoeba histolytica
Pathway
ehi03020  RNA polymerase
ehi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    EHI_087360 (169.t00023)
  09124 Replication and repair
   03420 Nucleotide excision repair
    EHI_087360 (169.t00023)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehi03021]
    EHI_087360 (169.t00023)
   03400 DNA repair and recombination proteins [BR:ehi03400]
    EHI_087360 (169.t00023)
Transcription machinery [BR:ehi03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     EHI_087360 (169.t00023)
DNA repair and recombination proteins [BR:ehi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      EHI_087360 (169.t00023)
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L
Other DBs
NCBI-GeneID: 3405673
NCBI-ProteinID: XP_651372
UniProt: C4LXS9
LinkDB
AA seq 112 aa
MNAPDLNEIYVMKPNEQKILCEENGHVCKFTLVKEDHTAGNILRVMLLRNPHVLFAGYRQ
PHPLNYVIEMTIRTDMTITPKQALEQAMDDVIHEIEIMQNEFEAASVGINSY
NT seq 339 nt   +upstreamnt  +downstreamnt
atgaacgcaccagatttaaatgaaatttatgttatgaaaccaaatgaacaaaaaattttg
tgtgaagagaatggtcatgtttgtaaatttactttggttaaagaagaccatacagctgga
aatattcttcgtgttatgttattaagaaatcctcatgtattatttgcgggatatagacaa
cctcatccattaaattatgttattgaaatgactattagaacagatatgacaataactcct
aaacaagctttagaacaagcaatggatgatgttattcatgaaatagaaataatgcaaaat
gaatttgaagctgcatcagtaggaattaattcatattaa

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