Entamoeba histolytica: EHI_098300
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Entry
EHI_098300 CDS
T00238
Symbol
77.t00020
Name
(RefSeq) U2 snRNP auxiliary factor large subunit
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
ehi
Entamoeba histolytica
Pathway
ehi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EHI_098300 (77.t00020)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehi03041
]
EHI_098300 (77.t00020)
Spliceosome [BR:
ehi03041
]
Complex A
U2 snRNP components
U2 related factors
EHI_098300 (77.t00020)
Complex B
EHI_098300 (77.t00020)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
3407924
NCBI-ProteinID:
XP_653619
UniProt:
C4LXB3
LinkDB
All DBs
AA seq
712 aa
AA seq
DB search
MAGRYDRSRSRERRYDRDSRSVSRRRRSDYRSSDYSRERDDRRRYYDRYDRREYSPRDRI
RYKSSRRRTRREYSRNEDREDRHRRVPEEERYNRSIRRRADRSPSLSPLGDKLPSRWDEQ
PKAIDSVQISQQLNVHQERAAKRIYVGNINSSTSEKDIVDAFNEAMRRGDYVDKNDTRDI
ITHIEVNYERSYAFLEFRTLEEAVKALSLDGLTIKGASVKVRRPKDYNPVLPFISGLSQL
MEPGTTNPRESILYMGNIPLQMTDEQIRKKLENLNPLKNFFVIRDPDLGAPQGKCYCLFE
YQNPEYKEKILTFDGINLGGNKIEVCSGVDGFKHLPKASLNELFSKMFPHTTDLVIGTLL
NSSVGYSTVFEKILKPSEKIEDQHVSRIIIIFNMVYPEDLTDQQRYIELIDDIRFVCQEY
GEVESISIPRPTEENKKPSGLGRVFIEFKTIEGAIKCWKEIIKKRYDNRSLLVGFYSEKK
YANRMFGYMEEEKDDEEEKDTRMEEAPNELSQNTTTEIKENDNQNIPIIKELPNTTLQNE
VRENIHQNENVQEEKIKEETKENNNQPNDLKEIKIEEDINPQNNIQETKMEEEKTETKNQ
HEVTNENSLNSLPQNEIMETINQKDIITQKQTKDCDGQNNITYDNKIEKEIQNNGTREIL
NVPAQNEIKECNYQSIYLEQSGMEEEVPNVVPQNKIEGDITQEVKTEEEIKE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaggtatgataggtctcgttcaagagaacgcagatatgatagagatagtaga
agcgttagtaggcgtcgaagaagtgattatagaagtagtgattattcaagagaaagagat
gataggagaaggtattatgataggtatgacagaagagaatatagtccaagagataggata
aggtataaatcaagtagaagaagaacaaggagagaatatagtcgtaatgaggacagagaa
gatagacatagaagagtacctgaagaagaacgttataatagaagcattagaagaagagca
gatagatctccatctttatcaccactcggagataaacttccttcaagatgggacgaacag
ccaaaagctattgactctgttcaaatatctcaacaattaaatgtacatcaagaacgagcg
gctaaaagaatttacgttggtaatattaattcttctacatcagaaaaagatattgttgat
gcgtttaatgaagcaatgagaagaggagattatgtagataaaaatgatactcgtgatatt
atcactcacatagaagtaaattatgaaaggtcatatgcatttcttgaatttagaacatta
gaagaagcagtcaaagcattgtctctggatggtttaacaattaaaggagcatcagttaaa
gtgcgtagaccaaaagactataatcctgttttaccatttattagtggtctttctcaatta
atggaacctggaacaacaaatcccagagaatctattttgtatatgggtaatattccattg
caaatgactgatgaacaaatacgcaagaaattagagaatttaaatccattaaaaaatttc
tttgttataagagatcctgaccttggggcaccacaaggaaaatgttattgtttatttgaa
tatcaaaaccctgaatataaagagaaaattctaacttttgatggaatcaatttaggtgga
aataaaattgaagtgtgtagtggagtagatggatttaaacacctaccaaaagcttcttta
aatgaactattttcaaagatgtttcctcataccactgatttagtaattggaaccttatta
aattcatctgtcggatattctactgtgtttgagaaaatattaaaaccatcagaaaagata
gaagaccaacatgtcagtagaattattatcatatttaatatggtatatccagaagacctt
actgaccaacaacgatatattgaattaattgatgacattagatttgtatgtcaggaatat
ggagaggttgagagtattagtattccaagaccaacggaagaaaataaaaaaccaagtggt
cttggaagggtctttattgaatttaaaactattgaaggggcaattaaatgttggaaagaa
ataataaaaaaaagatatgataataggtcattattagttgggttttatagtgaaaagaaa
tatgcaaatagaatgtttggatacatggaagaagaaaaagatgatgaagaagagaaagac
actcgaatggaagaagctcctaatgaattatctcaaaacacaaccacagaaataaaagaa
aatgataaccaaaatatacccataataaaagaattaccaaatacaacacttcaaaatgaa
gtgagagaaaacattcatcaaaatgaaaatgttcaagaagaaaaaataaaagaagaaaca
aaagaaaataacaatcaacctaatgacttgaaagaaattaaaattgaagaagacataaat
cctcaaaataatattcaagaaactaaaatggaagaagaaaaaacagagactaaaaaccaa
catgaagttacaaatgaaaactcactaaactcattaccccaaaatgaaataatggagact
atcaatcaaaaagatattattactcaaaaacaaactaaagactgtgatggtcaaaataat
attacctatgataataaaatagaaaaagaaatacaaaacaatggaacaagagaaatccta
aatgtaccagctcaaaatgaaataaaagaatgtaattatcaaagcatttatttggaacaa
agtggaatggaagaagaagttccaaacgtagtacctcaaaataaaatagaaggggatatt
actcaagaagtcaaaacagaagaagaaataaaagaatga
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