Entamoeba histolytica: EHI_099850
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Entry
EHI_099850 CDS
T00238
Symbol
173.t00021
Name
(RefSeq) replication factor C familiy protein
KO
K10756
replication factor C subunit 3/5
Organism
ehi
Entamoeba histolytica
Pathway
ehi03030
DNA replication
ehi03410
Base excision repair
ehi03420
Nucleotide excision repair
ehi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ehi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EHI_099850 (173.t00021)
03410 Base excision repair
EHI_099850 (173.t00021)
03420 Nucleotide excision repair
EHI_099850 (173.t00021)
03430 Mismatch repair
EHI_099850 (173.t00021)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ehi03032
]
EHI_099850 (173.t00021)
03036 Chromosome and associated proteins [BR:
ehi03036
]
EHI_099850 (173.t00021)
03400 DNA repair and recombination proteins [BR:
ehi03400
]
EHI_099850 (173.t00021)
DNA replication proteins [BR:
ehi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
EHI_099850 (173.t00021)
DNA Replication Termination Factors
ELG1-RFC complex
EHI_099850 (173.t00021)
Chromosome and associated proteins [BR:
ehi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
EHI_099850 (173.t00021)
DNA repair and recombination proteins [BR:
ehi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
EHI_099850 (173.t00021)
Check point factors
HRAD17(Rad24)-RFC complex
EHI_099850 (173.t00021)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
DNA_pol3_delta2
Rep_fac_C
AAA_22
AAA_lid_RFC1
Rad17
RuvB_N
AAA_14
AAA_assoc_2
DUF815
ResIII
AAA_18
AAA_11
AAA_5
AAA_16
AAA_24
Mg_chelatase
AAA_19
AAA_7
NPHP3_N
nSTAND3
AAA_30
Sigma54_activ_2
ATPase_2
RCF1-5-like_lid
PhoH
TniB
NB-ARC
nSTAND_NTPase5
DUF87
TIP49
RNA_helicase
AAA_33
AAA_3
AAA_2
DNA_pol3_delta
bpMoxR
AAA_28
AAA_25
ABC_tran
SLFN-g3_helicase
CobA_CobO_BtuR
AAA_17
Motif
Other DBs
NCBI-GeneID:
3405587
NCBI-ProteinID:
XP_651283
UniProt:
C4M6G5
LinkDB
All DBs
AA seq
325 aa
AA seq
DB search
MSLPWVEKYRPSTTDGIFGHEYILESLKQFINANQIPHMLFYGPPGTGKTTTALAIVKQL
CGTKFSALVLELNASDERGIDVVRDQIKSFASTRTLYTNCTKFIILDESDKLTKDAQNAL
RRTLEQFSANCRFIFICNEVHLITPAIQSRCAKMRFGPLSPDALTKIVENITMKEGMEID
EDAKKSIIEISKGDARSIINTLQALSMTCKQITNSTLYTMVGLPTPAQIDDIISELLSSP
YLESFTVVDNLIKAGLSLNDIIIRVVPKLIEGKLISVLDKTARIQCLYQLSLIEQALSIG
GNERTQTAAFVAAFQLLQTSSPMLS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttccgtgggtggaaaagtaccgtccttcaactacagatggtatatttggtcat
gaatatattcttgagtctttaaaacaatttattaatgctaaccaaatacctcatatgctt
ttttatggtccacctggcacaggtaaaacaacaacagctttggctattgtaaaacaatta
tgtggaactaaattctctgcattagtattagaactaaatgcatcagatgaaagaggaatt
gatgttgttagagatcaaatcaaatcctttgcatcaacacgtactttatatactaattgt
actaaatttattatattagatgaaagtgataaattaactaaagatgctcaaaatgcactt
cgaagaacattagaacaattttctgcaaattgtagatttattttcatttgtaatgaagtt
catttaataaccccagctattcaatcacgttgtgcaaaaatgagatttggtccattatct
ccagatgctttaacaaaaattgttgaaaatattacaatgaaagaaggtatggaaattgat
gaagatgcaaaaaaatctatcatagaaatatcaaaaggagatgctagaagtattattaat
actttacaggcactgtcaatgacttgtaaacaaattactaattcaactttatacacaatg
gttggattacctactccagcacaaattgatgatattatttcagagttattaagttcacct
tatcttgaatcttttactgttgtagataatttaattaaagctggactttctttaaatgat
attatcattcgtgtggtacctaaattaattgaagggaaattaatttctgtcttagataaa
actgctagaattcaatgtctttaccaactttctcttattgaacaagcattatctattggt
ggaaatgaacgaactcaaacagcagcttttgtagcagcctttcaattattacaaacttca
tctccaatgttaagttaa
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