KEGG   Entamoeba histolytica: EHI_142940
Entry
EHI_142940        CDS       T00238                                 
Symbol
217.t00016
Name
(RefSeq) TPR repeat protein
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
ehi  Entamoeba histolytica
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehi03021]
    EHI_142940 (217.t00016)
Transcription machinery [BR:ehi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     EHI_142940 (217.t00016)
SSDB
Motif
Pfam: TPR_2 TPR_1 TPR_19 TPR_12 TPR_14 TPR_CcmH_CycH TPR_8 TPR_16 TPR_6 ANAPC3 TPR_11 TPR_10 TPR_Slam ARM_TT21_2nd Coatomer_E BTAD PPR_1 PPR_2
Other DBs
NCBI-GeneID: 3404765
NCBI-ProteinID: XP_650475
UniProt: C4M6D0
LinkDB
AA seq 922 aa
MSELVALFAPEPIKLMIDPTRYVIIPRPITIQFHKLKSYFQKDPIATVQVVASLVREQRR
EEAQKFLLEIMTNSSLSQLSQTIERYFYIIIASLNAYTGNEQNNKICHEYLEKSKRFGDN
EFAECIYGFNAFYSKKPCKDYFKRALELNKNYAPALIGLALCELKDHKDGVALSYFIQAL
KKQPTNVSIRCGIGRIYYSQKEIKLAIRCYESALVLDNICMDALINLSRIYWDIRTPQTV
KRALELANRALMIDNKCAPAAIVLCEAAMKCNNYKVVSEFANVAINYGNEQEKIYGHFTL
GRIAHQKQDFVKAKEEYNIGYLSDTKCMFPALHYRMAQVLFREKNYIQVEKILMNCLKYN
GGDFDVLKLLGFTELKLNKINETIEYLEKASVFKIDYTIELIVSSLLEEKQPKKALEHYQ
RINEINSTVEVLNNMGCCYYFIQELIKSKECFEKALNMDKGSELRTTLLFNKGRVLEEMK
LWDEANKCYQEIIKENPWYFDARIRRCYHLWDEKQYNLASQELVETIINFPNCEDAKLLL
GEMLCQQGKIDDAFKIFNSVTNHNRTNLYAFLALARVMAKYGRQDPKQQLEAVKLYGKIL
NADPTNVLALGGLALTTAERKENSSNPIPFNVIIESLQRVNDVCPSYEVMFSMGTCYYNA
HNIQMAKSIFESTLNQYGEQVEVLNGLAQCEFMLNRYKEALEHLERALKIEPVSQIVYNY
QLVASCYLEEQKQKKKLYKEENEQLRQNVIGYLQQFNNLKYKMKTFEENWKSLIEQARKD
QEEKQRLIKEHEEQRKRKIEEENQRKKEEEEKEQQRRMEEKKMIIEKTKKEQEMIGKRIE
ERLKDVEENTTEKKKKEDRKEKKERKRKVLEEEEEADGENKVSYKRKERVNEKKMEEEKK
EDNIEEKKENHSIEQSDDVVSL
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgagtgagttggttgccttatttgcacctgaaccaatcaaattaatgattgatccaaca
cggtacgtaataattccacgaccaattactattcaatttcataaattaaaatcatatttt
caaaaagatccgattgctacagttcaggttgttgcttcattagttagagaacaaagaaga
gaagaagcacaaaaatttcttttagaaataatgacaaatagttcattatcacaattaagt
caaacaatagaacgatatttttatataataattgcatcattaaatgcgtatacaggaaat
gaacaaaataacaaaatatgtcatgaatatcttgagaaatcaaaacgatttggagataat
gaatttgctgaatgtatttatggatttaatgcattttattctaaaaaaccatgtaaagac
tactttaaacgtgcattagaattaaataaaaattatgctccagcattaattggtcttgca
ttatgtgaattaaaagatcataaagatggagttgcattatcttattttattcaagcactt
aaaaaacaaccaacaaatgtaagtattagatgtggtattggtagaatatattattctcaa
aaagaaattaaattagcaattcgatgttatgaaagtgcattagttcttgataatatttgt
atggatgcattaattaatctttcaagaatatattgggatattagaactccacaaacagtt
aaaagagcattagaattagctaatagagcattaatgattgataataaatgtgcaccagca
gcaatagtactttgtgaagcagcaatgaaatgtaataattataaagtagtttcagaattt
gcaaatgttgcaataaattatggaaatgaacaagaaaagatttatggacattttacttta
ggaagaattgcacatcaaaaacaagattttgtaaaagcaaaagaagaatataatattggt
tatttgtctgatactaaatgtatgttccctgcattacattatagaatggcacaagtttta
tttagagaaaaaaattatattcaagtagaaaagattttaatgaattgtttaaaatataac
ggtggtgattttgatgttttaaaattacttggatttactgaattaaaacttaataaaatt
aatgaaacgattgaatatttggaaaaagcttctgtttttaaaattgattatacaattgaa
ttaattgtttcttctttattagaagaaaaacaaccaaaaaaagcattagaacattatcaa
agaattaatgaaattaatagtactgtagaagtacttaataatatggggtgttgctattat
tttattcaagaattaattaaaagtaaagaatgttttgaaaaagcattaaatatggataaa
ggtagtgaattaaggacaacacttctttttaataaaggaagagtattagaagaaatgaaa
ttatgggatgaagcaaataaatgttatcaggaaattattaaagaaaatccatggtatttt
gatgcaagaatcagaaggtgttatcatttatgggatgaaaaacaatataatttagcatca
caagaattagttgaaacaattattaattttcctaattgtgaagatgctaaattattattg
ggagaaatgttatgtcaacaaggtaaaattgatgacgcttttaaaatatttaattcagta
acaaatcataatagaacaaatttatatgctttcttagctcttgcaagagtaatggctaaa
tatggtagacaagaccctaaacaacaacttgaagctgttaaattatatggaaaaattctt
aatgctgatccaactaatgtattagctttaggaggtttagctttaactactgctgaaaga
aaagaaaattcatctaatccaattccatttaatgttataatagaaagtcttcaaagagta
aatgatgtttgtccatcttatgaagttatgttttctatgggaacatgttattataatgca
cataatattcagatggctaaatctatatttgaaagtacacttaatcaatatggtgaacaa
gtagaagtattaaatggattagctcaatgtgagtttatgttaaatagatataaagaagca
ttagaacaccttgaaagagcattaaaaattgagccagtttcacaaattgtatataactat
caattagttgcttcttgttatttagaagaacaaaaacaaaaaaagaagttatataaagaa
gaaaatgaacaattaagacaaaatgttattggttatttacaacaatttaataatttaaag
tataaaatgaaaacatttgaagagaattggaaaagtttaattgaacaagcaagaaaagac
caagaagaaaaacaaagactcattaaagaacatgaagaacaaaggaaaaggaaaattgaa
gaagaaaatcagagaaaaaaagaagaagaagaaaaagaacaacaacgaagaatggaagag
aagaagatgataattgagaaaacaaagaaagaacaagaaatgattggtaaaaggattgaa
gaaagactaaaagatgttgaagaaaatacaacagaaaagaaaaagaaagaagatagaaaa
gaaaagaaagaaagaaaaagaaaagttcttgaagaagaagaagaagctgatggagaaaat
aaagtttcttataaaagaaaagaacgagtgaatgaaaagaaaatggaagaagaaaagaaa
gaagataatattgaagaaaagaaagaaaatcattcaatagaacaaagtgatgatgtagtt
tccctttaa

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