KEGG   Entamoeba histolytica: EHI_153530
Entry
EHI_153530        CDS       T00238                                 
Symbol
13.t00023
Name
(RefSeq) pre-mRNA-splicing factor PRP46
  KO
K12862  pleiotropic regulator 1
Organism
ehi  Entamoeba histolytica
Pathway
ehi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ehi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EHI_153530 (13.t00023)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ehi03041]
    EHI_153530 (13.t00023)
   03400 DNA repair and recombination proteins [BR:ehi03400]
    EHI_153530 (13.t00023)
Spliceosome [BR:ehi03041]
 Complex B
  Other components
   Prp19 complex
    EHI_153530 (13.t00023)
 Complex C
   Prp19-CDC5 complex
    EHI_153530 (13.t00023)
DNA repair and recombination proteins [BR:ehi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    EHI_153530 (13.t00023)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SPT8 ANAPC4_WD40 NBCH_WD40 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_like Beta-prop_NOL10_N WD_LRWD1 Beta-prop_Aladin Beta-prop_IFT140_1st Beta-prop_ACSF4 Beta-prop_WDR19_1st Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 3410667
NCBI-ProteinID: XP_656363
UniProt: C4LSE4
LinkDB
AA seq 311 aa
MLVKKESNEQKTTDVIQWKLKRVICSHKGWVSSICFDPSNQWFCTGSHDETIKIFGMIRG
EQRLTLTGHIGAVKSLKVSPRHPYLFSAGDDKTIKCWDLESNKVVKHFHGHLSGIEVVDL
HPTIDVIGSGGRDSVVRLWDIRTKQSVDVLEGHTSTIYDLKMREESPHLISSSADSTIKM
WDIIAGKCMKTLTQHTKGVRCVEVWDKENMVSASFDSIKLWDKGEFVENLYKPNDIINTI
KRNQDGTIISSSNNGVITVFNLNTITQTLHNIPQPGSLEGEKGILCSTFDQTGLRFFTGC
VDKTIKMYAPQ
NT seq 936 nt   +upstreamnt  +downstreamnt
atgttagttaagaaagaaagcaatgaacagaaaacaacggatgtgattcaatggaaacta
aaacgagtaatttgtagtcataaaggttgggtttcttcaatttgctttgacccatcgaat
caatggttttgtacaggttcacatgatgaaactatcaaaatatttggaatgatccgaggt
gaacaacgattgacattaacagggcatattggagctgtgaaatcattgaaagtttcacca
agacacccatacttattttctgctggtgatgataaaacaattaaatgttgggatttagaa
tcaaataaagttgtcaaacatttccatggtcatttatctggaattgaggttgttgactta
cacccaacaatagacgttatagggtcaggtggaagagattctgttgtaagactgtgggat
attaggactaaacaatctgttgatgttcttgaaggacatacatcaacaatttatgactta
aagatgagagaagaatcaccacatcttattagttcatctgcagatagtacaattaagatg
tgggatattattgcaggtaaatgtatgaaaacattaactcaacacacaaaaggagttcgt
tgtgtagaggtttgggataaagaaaatatggttagtgcaagttttgattcaattaaatta
tgggataaaggagagtttgttgaaaatctctataagccaaatgatattattaatacaatt
aaacgtaatcaagatggaacaattatttcctcatcaaacaatggtgtaataacagttttt
aatttaaacacaataacacaaacattacacaatattccccaacctggttcattagaagga
gaaaaaggaatattatgtagtacttttgatcaaacaggattaagattttttacaggatgt
gtagataaaacaattaaaatgtatgctccacaataa

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